You are browsing environment: FUNGIDB
CAZyme Information: ALNC14_061950:RNA-p1
You are here: Home > Sequence: ALNC14_061950:RNA-p1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Albugo laibachii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Albuginaceae; Albugo; Albugo laibachii | |||||||||||
| CAZyme ID | ALNC14_061950:RNA-p1 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH6 | 11 | 271 | 2.7e-55 | 0.9319727891156463 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 396075 | Glyco_hydro_6 | 1.57e-41 | 13 | 269 | 2 | 286 | Glycosyl hydrolases family 6. |
| 227616 | CelA1 | 1.68e-15 | 68 | 299 | 191 | 440 | Cellulase/cellobiase CelA1 [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 7.87e-241 | 1 | 312 | 1 | 312 | |
| 6.60e-80 | 4 | 311 | 33 | 326 | |
| 5.82e-72 | 3 | 309 | 30 | 322 | |
| 6.41e-69 | 4 | 309 | 29 | 308 | |
| 6.18e-68 | 3 | 301 | 25 | 298 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.27e-25 | 13 | 291 | 34 | 353 | Chain A, Cellobiohydrolase Family 6 [Thermochaetoides thermophila] |
|
| 1.45e-24 | 48 | 294 | 53 | 314 | GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],5JX5_B GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],5JX5_C GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],5JX5_D GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_A GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_B GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_C GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_D GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102] |
|
| 5.58e-24 | 64 | 268 | 69 | 266 | CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF A THERMOPHILIC ENDOCELLULASE [Thermobifida fusca],2BOD_X Catalytic domain of endo-1,4-glucanase Cel6A from Thermobifida fusca in complex with methyl cellobiosyl-4-thio-beta-cellobioside [Thermobifida fusca] |
|
| 2.34e-23 | 2 | 294 | 19 | 352 | Cellobiohydrolase Ii (Cel6a) From Humicola Insolens [Humicola insolens] |
|
| 2.40e-23 | 2 | 294 | 21 | 354 | Mutant D416A of the CELLOBIOHYDROLASE CEL6A FROM HUMICOLA INSOLENS in complex with methyl-cellobiosyl-4-deoxy-4-thio-beta-D-cellobioside [Humicola insolens] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.93e-22 | 64 | 268 | 100 | 297 | Endoglucanase E-2 OS=Thermobifida fusca OX=2021 GN=celB PE=1 SV=2 |
|
| 9.65e-21 | 2 | 291 | 135 | 465 | Exoglucanase-6A OS=Humicola insolens OX=34413 GN=cel6A PE=1 SV=1 |
|
| 1.61e-20 | 26 | 268 | 71 | 301 | Endoglucanase A OS=Thermobispora bispora OX=2006 GN=celA PE=3 SV=1 |
|
| 3.36e-19 | 42 | 291 | 148 | 439 | Probable 1,4-beta-D-glucan cellobiohydrolase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=cbhC PE=3 SV=1 |
|
| 6.15e-19 | 64 | 289 | 237 | 438 | Endoglucanase A OS=Cellulomonas fimi OX=1708 GN=cenA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000005 | 0.000035 |