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CAZyme Information: ALNC14_051350:RNA-p1

You are here: Home > Sequence: ALNC14_051350:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Albugo laibachii
Lineage Oomycota; NA; ; Albuginaceae; Albugo; Albugo laibachii
CAZyme ID ALNC14_051350:RNA-p1
CAZy Family GH17
CAZyme Description glycoside hydrolase putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
423 45959.95 9.7781
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AlaibachiiNc14 14629 890382 180 14449
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in ALNC14_051350:RNA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH17 21 279 3.1e-19 0.9839228295819936

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227625 Scw11 2.31e-18 12 254 37 283
Exo-beta-1,3-glucanase, GH17 family [Carbohydrate transport and metabolism].
366033 Glyco_hydro_17 1.23e-06 170 278 171 304
Glycosyl hydrolases family 17.
311610 Glyco_hydro_53 2.27e-04 94 213 115 240
Glycosyl hydrolase family 53. This domain belongs to family 53 of the glycosyl hydrolase classification. These enzymes are enzymes are endo-1,4- beta-galactanases (EC:3.2.1.89). The structure of this domain is known and has a TIM barrel fold.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.41e-258 1 423 1 423
1.41e-41 21 282 573 834
3.60e-36 22 282 29 288
2.86e-32 22 282 29 288
5.61e-25 3 270 9 269

PDB Hits      help

ALNC14_051350:RNA-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.81e-09 40 278 45 296
Glucan 1,3-beta-glucosidase ARB_02797 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02797 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.200873 0.799119 CS pos: 19-20. Pr: 0.7642

TMHMM  Annotations      help

There is no transmembrane helices in ALNC14_051350:RNA-p1.