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CAZyme Information: ALNC14_033220:RNA-p1

You are here: Home > Sequence: ALNC14_033220:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Albugo laibachii
Lineage Oomycota; NA; ; Albuginaceae; Albugo; Albugo laibachii
CAZyme ID ALNC14_033220:RNA-p1
CAZy Family AA6
CAZyme Description conserved hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
185 20516.16 6.3161
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AlaibachiiNc14 14629 890382 180 14449
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in ALNC14_033220:RNA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 2 166 1.8e-59 0.6408163265306123

CDD Domains      help

ALNC14_033220:RNA-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.76e-146 1 185 1 185
2.53e-123 1 185 27 211
5.61e-63 10 176 34 208
8.73e-63 10 176 96 268
3.95e-62 10 176 98 272

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.35e-23 13 157 18 170
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

ALNC14_033220:RNA-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000045 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in ALNC14_033220:RNA-p1.