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CAZyme Information: ALNC14_030970:RNA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Albugo laibachii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Oomycota; NA; ; Albuginaceae; Albugo; Albugo laibachii | |||||||||||
| CAZyme ID | ALNC14_030970:RNA-p1 | |||||||||||
| CAZy Family | AA2 | |||||||||||
| CAZyme Description | glycoside hydrolase putative | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH6 | 34 | 289 | 1.5e-51 | 0.9455782312925171 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 396075 | Glyco_hydro_6 | 3.03e-32 | 39 | 288 | 2 | 288 | Glycosyl hydrolases family 6. |
| 227616 | CelA1 | 7.76e-13 | 74 | 318 | 179 | 440 | Cellulase/cellobiase CelA1 [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 4.71e-262 | 1 | 347 | 1 | 347 | |
| 1.26e-84 | 1 | 330 | 1 | 324 | |
| 1.24e-76 | 21 | 331 | 26 | 334 | |
| 3.48e-75 | 16 | 320 | 18 | 316 | |
| 3.58e-68 | 22 | 344 | 18 | 326 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.10e-25 | 55 | 285 | 40 | 266 | CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF A THERMOPHILIC ENDOCELLULASE [Thermobifida fusca],2BOD_X Catalytic domain of endo-1,4-glucanase Cel6A from Thermobifida fusca in complex with methyl cellobiosyl-4-thio-beta-cellobioside [Thermobifida fusca] |
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| 2.05e-24 | 55 | 285 | 40 | 266 | Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca [Thermobifida fusca],2BOF_X Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca in complex with cellotetrose [Thermobifida fusca],2BOG_X Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca in complex with methyl cellobiosyl-4-thio-beta- cellobioside [Thermobifida fusca] |
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| 5.20e-17 | 84 | 316 | 79 | 352 | Crystal structure of a fungal chimeric cellobiohydrolase Cel6A [Humicola insolens] |
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| 1.75e-16 | 84 | 316 | 79 | 352 | Crystal structure of a fungal chimeric cellobiohydrolase Cel6A [Humicola insolens] |
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| 3.41e-16 | 81 | 316 | 82 | 357 | Chain A, Cellobiohydrolase [Coprinopsis cinerea],3VOH_A Chain A, Cellobiohydrolase [Coprinopsis cinerea],3VOI_A Chain A, Cellobiohydrolase [Coprinopsis cinerea] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.68e-24 | 55 | 285 | 71 | 297 | Endoglucanase E-2 OS=Thermobifida fusca OX=2021 GN=celB PE=1 SV=2 |
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| 1.78e-21 | 42 | 316 | 199 | 446 | Endoglucanase A OS=Cellulomonas fimi OX=1708 GN=cenA PE=1 SV=1 |
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| 1.33e-19 | 39 | 290 | 58 | 306 | Endoglucanase A OS=Thermobispora bispora OX=2006 GN=celA PE=3 SV=1 |
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| 1.68e-17 | 84 | 316 | 182 | 456 | Putative endoglucanase type B OS=Fusarium oxysporum OX=5507 PE=2 SV=1 |
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| 5.94e-16 | 84 | 316 | 181 | 454 | Probable 1,4-beta-D-glucan cellobiohydrolase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=cbhC PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.004954 | 0.995021 | CS pos: 17-18. Pr: 0.6956 |