CAZyme Information: ALNC14_021980:RNA-p1

Basic Information

• Species: Albugo laibachii
• Lineage: Oomycota; NA; ; Albuginaceae; Albugo; Albugo laibachii
• CAZyme ID: ALNC14_021980:RNA-p1
• CAZy Family: AA2
• CAZyme Description: betaglucan synthesisassociated protein putative

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
741		82645.34	8.0370

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_AlaibachiiNc14	14629	890382	180	14449

• Gene Location: location=FR824063:33406-35782(-)

Full Sequence      

MELDNEHLRPSYTANSFLRTTIHFVVKLRIMLAYLTIAALTQVLAEDYSTRSGIRVWVDP
DTPKDRQSFTSSRGEKWELTMSDEFNTPGRSFKPGSDHIWTSIEKPDGVNAALQVYSHNM
TTTACDKDGTCYFVIITDEAKIKLTTWNTFQKPPGLQTKAFYYRSGMVQTWNKFCYQGGM
LEVRALLPGALSKKSGNPDVAGGDSNRVKNIAYYPLWCGAWLLGNLGRAIFSASTNRMWP
YSYNECNENVLNASYQRISACNSKPGYGLNPNQGRGAGEIDIFEGAGTEISSSIQIAPGM
PVDFRRFDDDNGCVYLQQCPRGVNNVGVPASMYKVRGHLSWYQGLRYGANDYCAPDPKQK
QSLSSIKASVQGGIEKDKCDFSTCPASLDVYGDLGKKDDGSGENWGINSKGTCFAFQNPY
AGTFCCNPGNVYKRCPQQGLDEYPGDFRYKYQMDAISANWHLHVGIYRKYHIYQVEWITG
KTGYVRWMLAGKPFFEIPAKALTDPPQDAAKSNPRKIMVEEPLYIIFNVALSSTWGAIPP
NPGQPCRGNGTSATNSRVCDEFPMRMKIDYVRLYQDTSKNSSMTITCDPPTHPTKKWIEG
HLKEYEDAENKMIAVSGKAFCEKDDDCSVAQDVSRVRTGVCYKKRCKCVTGSWTGPRCSS
VQSMNGDDDLSIDTKNSFGPPFLVGLFLTILIGAATFGSVYYSFITAKKMEESMNKRNEA
KAATDQPRMGKEDRTDFGNAH

Enzyme Prediction     

EC	-	-

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH16	83	300	1.5e-66	0.5858895705521472

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
397841	SKN1	3.49e-69	48	608	87	479	Beta-glucan synthesis-associated protein (SKN1). This family consists of the beta-glucan synthesis-associated proteins KRE6 and SKN1. Beta1,6-Glucan is a key component of the yeast cell wall, interconnecting cell wall proteins, beta1,3-glucan, and chitin. It has been postulated that the synthesis of beta1,6-glucan begins in the endoplasmic reticulum with the formation of protein-bound primer structures and that these primer structures are extended in the Golgi complex by two putative glucosyltransferases that are functionally redundant, Kre6 and Skn1. This is followed by maturation steps at the cell surface and by coupling to other cell wall macromolecules.
185689	GH16_fungal_KRE6_glucanase	2.21e-52	79	575	1	295	Saccharomyces cerevisiae KRE6 and related glucanses, member of glycosyl hydrolase family 16. KRE6 is a Saccharomyces cerevisiae glucanase that participates in the synthesis of beta-1,6-glucan, a major structural component of the cell wall. It is a golgi membrane protein required for normal beta-1,6-glucan levels in the cell wall. KRE6 is closely realted to laminarinase, a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans.
185693	GH16_laminarinase_like	3.94e-12	469	574	159	235	Laminarinase, member of the glycosyl hydrolase family 16. Laminarinase, also known as glucan endo-1,3-beta-D-glucosidase, is a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans.
225182	BglS	7.75e-11	58	299	30	215	Beta-glucanase, GH16 family [Carbohydrate transport and metabolism].
185691	GH16_Strep_laminarinase_like	4.30e-04	470	575	174	259	Streptomyces laminarinase-like, member of glycosyl hydrolase family 16. Proteins similar to Streptomyces sioyaensis beta-1,3-glucanase (laminarinase) present in Actinomycetales as well as Peziomycotina. Laminarinases belong to glycosyl hydrolase family 16 and hydrolyze the glycosidic bond of the 1,3-beta-linked glucan, a major component of fungal and plant cell walls and the structural and storage polysaccharides (laminarin) of marine macro-algae. Members of the GH16 family have a conserved jelly roll fold with an active site channel.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CCA16055.1|GH16_2	0.0	1	741	1	741
UIZ28152.1|GH16	8.31e-285	31	740	1	715
UIZ28149.1|GH16	2.83e-274	32	718	13	716
CCA26187.1|GH16_2	9.02e-267	48	613	25	596
UIZ28151.1|GH16	6.03e-266	25	712	5	712

PDB Hits     

ALNC14_021980:RNA-p1 has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|P32486|KRE6_YEAST	7.98e-37	41	620	289	702	Beta-glucan synthesis-associated protein KRE6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=KRE6 PE=1 SV=2
sp|P33336|SKN1_YEAST	4.37e-36	58	620	359	754	Beta-glucan synthesis-associated protein SKN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SKN1 PE=1 SV=1
sp|P87024|SKN1_CANAX	1.52e-31	48	620	325	729	Beta-glucan synthesis-associated protein SKN1 OS=Candida albicans OX=5476 GN=SKN1 PE=2 SV=1
sp|P87023|KRE6_CANAX	1.98e-30	48	620	321	732	Beta-glucan synthesis-associated protein KRE6 OS=Candida albicans OX=5476 GN=KRE6 PE=2 SV=1
sp|O13941|YEPB_SCHPO	8.81e-30	58	617	219	615	Uncharacterized beta-glucan synthesis-associated protein C23H3.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC23H3.11c PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
0.995102	0.004914

TMHMM  Annotations     

Start	End
683	705