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CAZyme Information: ALNC14_012470:RNA-p1

You are here: Home > Sequence: ALNC14_012470:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Albugo laibachii
Lineage Oomycota; NA; ; Albuginaceae; Albugo; Albugo laibachii
CAZyme ID ALNC14_012470:RNA-p1
CAZy Family AA2
CAZyme Description putative
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
650 74380.81 7.7111
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AlaibachiiNc14 14629 890382 180 14449
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.-:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT60 320 616 1.2e-95 0.9939393939393939

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
371506 GlcNAc 3.44e-66 321 617 2 350
Glycosyltransferase (GlcNAc). GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1, a ubiquitous eukaryotic protein, in the cytoplasm.
404519 2OG-FeII_Oxy_3 1.81e-16 204 305 2 94
2OG-Fe(II) oxygenase superfamily. This family contains members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily.
226274 EGL9 1.90e-12 87 304 23 238
Proline 4-hydroxylase (includes Rps23 Pro-64 3,4-dihydroxylase Tpa1), contains SM-20 domain [Translation, ribosomal structure and biogenesis, Posttranslational modification, protein turnover, chaperones].
379319 2OG-FeII_Oxy_4 7.82e-12 204 304 2 92
2OG-Fe(II) oxygenase superfamily. This family contains members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 650 1 650
6.46e-78 104 628 63 595
2.18e-63 93 578 56 552
3.21e-52 321 572 6 262
1.54e-49 321 628 4 295

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.07e-19 97 305 10 227
Prolyl Hydroxylase (PHD) involved in hypoxia sensing by Dictyostelium discoideum [Dictyostelium discoideum],6T8M_B Prolyl Hydroxylase (PHD) involved in hypoxia sensing by Dictyostelium discoideum [Dictyostelium discoideum],6T8M_C Prolyl Hydroxylase (PHD) involved in hypoxia sensing by Dictyostelium discoideum [Dictyostelium discoideum]
1.20e-14 65 304 15 221
Crystal structure of a Pseudomonas putida prolyl-4-hydroxylase (P4H) in complex with elongation factor Tu (EF-Tu) [Pseudomonas putida KT2440],4IW3_J Crystal structure of a Pseudomonas putida prolyl-4-hydroxylase (P4H) in complex with elongation factor Tu (EF-Tu) [Pseudomonas putida KT2440],4J25_A Crystal structure of a Pseudomonas putida prolyl-4-hydroxylase (P4H) [Pseudomonas putida KT2440],4J25_B Crystal structure of a Pseudomonas putida prolyl-4-hydroxylase (P4H) [Pseudomonas putida KT2440],4J25_C Crystal structure of a Pseudomonas putida prolyl-4-hydroxylase (P4H) [Pseudomonas putida KT2440],4J25_D Crystal structure of a Pseudomonas putida prolyl-4-hydroxylase (P4H) [Pseudomonas putida KT2440],4J25_E Crystal structure of a Pseudomonas putida prolyl-4-hydroxylase (P4H) [Pseudomonas putida KT2440],4J25_F Crystal structure of a Pseudomonas putida prolyl-4-hydroxylase (P4H) [Pseudomonas putida KT2440],4J25_G Crystal structure of a Pseudomonas putida prolyl-4-hydroxylase (P4H) [Pseudomonas putida KT2440],4J25_H Crystal structure of a Pseudomonas putida prolyl-4-hydroxylase (P4H) [Pseudomonas putida KT2440]
3.98e-06 231 312 163 239
Crystal structure and expression patterns of prolyl 4-hydroxylases from Phytophthora capsici [Phytophthora capsici LT1534],6IUQ_B Crystal structure and expression patterns of prolyl 4-hydroxylases from Phytophthora capsici [Phytophthora capsici LT1534]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.14e-53 321 572 6 262
[Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase OS=Dictyostelium discoideum OX=44689 GN=gnt1 PE=1 SV=2
5.60e-18 81 305 54 284
Prolyl 4-hydroxylase subunit alpha OS=Dictyostelium discoideum OX=44689 GN=phyA PE=1 SV=1
8.15e-10 95 305 18 213
Prolyl hydroxylase EGLN3 OS=Mus musculus OX=10090 GN=Egln3 PE=1 SV=1
8.86e-09 95 305 18 213
Prolyl hydroxylase EGLN3 OS=Rattus norvegicus OX=10116 GN=Egln3 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000048 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in ALNC14_012470:RNA-p1.