logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: ALNC14_006900:RNA-p1

You are here: Home > Sequence: ALNC14_006900:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Albugo laibachii
Lineage Oomycota; NA; ; Albuginaceae; Albugo; Albugo laibachii
CAZyme ID ALNC14_006900:RNA-p1
CAZy Family AA2
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
559 62847.57 8.3672
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AlaibachiiNc14 14629 890382 180 14449
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.-:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT1 173 493 7.4e-25 0.7382198952879581

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
340817 GT1_Gtf-like 5.51e-42 66 493 4 403
UDP-glycosyltransferases and similar proteins. This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
224732 YjiC 5.99e-29 64 492 2 396
UDP:flavonoid glycosyltransferase YjiC, YdhE family [Carbohydrate transport and metabolism].
273616 MGT 2.74e-23 69 492 1 387
glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. [Cellular processes, Toxin production and resistance]
278624 UDPGT 3.65e-11 162 519 110 466
UDP-glucoronosyl and UDP-glucosyl transferase.
177830 PLN02173 5.41e-08 309 429 248 368
UDP-glucosyl transferase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 559 1 559
1.48e-160 56 548 84 612
1.28e-51 64 495 3 421
9.72e-46 64 498 5 427
5.78e-44 64 501 3 432

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.19e-11 64 495 13 420
The crystal structure of macrolide glycosyltransferases: A blueprint for antibiotic engineering [Streptomyces antibioticus],2IYA_B The crystal structure of macrolide glycosyltransferases: A blueprint for antibiotic engineering [Streptomyces antibioticus]
1.34e-09 69 492 9 382
Chain A, Uncharacterized UDP-glucosyltransferase YjiC [Bacillus subtilis subsp. subtilis str. 168]
1.37e-09 69 492 9 382
Chain A, Uncharacterized UDP-glucosyltransferase YjiC [Bacillus subtilis subsp. subtilis str. 168],7BOV_A Chain A, Uncharacterized UDP-glucosyltransferase YjiC [Bacillus subtilis subsp. subtilis str. 168]
5.01e-08 66 429 11 404
Crystal structure of Medicago truncatula UGT85H2- Insights into the structural basis of a multifunctional (Iso) flavonoid glycosyltransferase [Medicago truncatula]
2.66e-07 306 428 258 396
Chain A, Glycosyltransferase [Calotropis gigantea],7W0K_A Chain A, Glycosyltransferase [Calotropis gigantea],7W0Z_A Chain A, Glycosyltransferase [Calotropis gigantea],7W10_A Chain A, Glycosyltransferase [Calotropis gigantea],7W11_A Chain A, Glycosyltransferase [Calotropis gigantea],7W1B_A Chain A, Glycosyltransferase [Calotropis gigantea],7W1H_A Chain A, Glycosyltransferase [Calotropis gigantea]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.75e-19 166 519 134 488
UDP-glucuronosyltransferase 3A1 OS=Bos taurus OX=9913 GN=UGT3A1 PE=2 SV=1
8.58e-18 166 519 133 488
UDP-glucuronosyltransferase 3A1 OS=Xenopus laevis OX=8355 GN=ugt3a1 PE=2 SV=1
1.52e-17 63 519 22 488
UDP-glucuronosyltransferase 3A2 OS=Mus musculus OX=10090 GN=Ugt3a2 PE=1 SV=2
8.36e-17 140 519 110 488
UDP-glucuronosyltransferase 3A1 OS=Homo sapiens OX=9606 GN=UGT3A1 PE=2 SV=1
2.60e-16 186 519 154 488
UDP-glucuronosyltransferase 3A2 OS=Homo sapiens OX=9606 GN=UGT3A2 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000217 0.999773 CS pos: 23-24. Pr: 0.9423

TMHMM  Annotations      download full data without filtering help

Start End
519 541