CAZyme Information: ALNC14_004300:RNA-p1

Basic Information

• Species: Albugo laibachii
• Lineage: Oomycota; NA; ; Albuginaceae; Albugo; Albugo laibachii
• CAZyme ID: ALNC14_004300:RNA-p1
• CAZy Family: AA17
• CAZyme Description: glycoproteinNacetylgalactosamine 3betagalactosyltransferase putative

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
372		43542.01	6.3533

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_AlaibachiiNc14	14629	890382	180	14449

• Gene Location: location=FR824048:63466-64584(+)

Full Sequence      

MLRFSLLPLFLSAYETATLSGHASISKYEVCAFDYSHSKAPLDLIQVVPQPQSILTNVRY
PRILCFVNTISTHLERAQAVAGTWGQRCDKLIFFSNVSGSGLSEMLNFEVIGLDVNSDHN
HLWGKHKASLAYVHTHFRHSYDWFYKADDDAYVIMENLKNYLSQPEIYSRWKTEPMQLGH
RLRLENNITQYYIVERALRNDFMRKYGRLIFNGGGPGYALNRMFLDNVVNSFSEYDCFSQ
KHSEMIPDDVAISFCMAWKDNFPVETRDYQGRERWHVDSLDGAYHSYLYDPNNWIFKFHE
TIGGVRARNECCAPDSVAMHYVTPNLMYHYERQLYWCRDGDSDTMHDYNSKFNYSISEKI
MEIPLEADRNEQ

Enzyme Prediction     

EC	2.4.1.122:25

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GT31	111	257	9.5e-16	0.6927083333333334

CDD Domains     

ALNC14_004300:RNA-p1 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CCA14287.1|GT31	5.97e-289	1	372	1	372
AIG56262.1|GT31	8.87e-110	21	362	20	349
UIZ22190.1|GT31	9.86e-105	92	361	1	276
AIG55842.1|GT31	2.00e-102	30	345	29	313
UIZ24342.1|GT31	8.79e-48	62	327	54	334

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7Q4I_A	7.88e-26	62	338	28	270	Chain A, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Drosophila melanogaster],7Q4I_B Chain B, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Drosophila melanogaster]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q9NS00|C1GLT_HUMAN	1.41e-27	62	371	88	354	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Homo sapiens OX=9606 GN=C1GALT1 PE=1 SV=1
sp|Q0VC84|C1GLT_BOVIN	5.49e-27	62	371	88	354	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Bos taurus OX=9913 GN=C1GALT1 PE=2 SV=1
sp|Q5F3G7|C1GLT_CHICK	3.64e-26	62	338	89	328	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Gallus gallus OX=9031 GN=C1GALT1 PE=2 SV=1
sp|Q9JJ06|C1GLT_MOUSE	6.59e-26	62	371	88	354	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Mus musculus OX=10090 GN=C1galt1 PE=1 SV=1
sp|Q9JJ05|C1GLT_RAT	3.25e-25	62	338	88	327	Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=C1galt1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
0.551814	0.448176

TMHMM  Annotations     

There is no transmembrane helices in ALNC14_004300:RNA-p1.