logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: AKAW_10051-t41_1-p1

You are here: Home > Sequence: AKAW_10051-t41_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus luchuensis
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus luchuensis
CAZyme ID AKAW_10051-t41_1-p1
CAZy Family GT2
CAZyme Description exopolygalacturonase B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
429 DF126486|CGC1 45672.78 4.4680
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AluchuensisIFO4308 11755 1033177 267 11488
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in AKAW_10051-t41_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 77 410 1e-57 0.8861538461538462

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 2.72e-23 82 390 24 303
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
177865 PLN02218 3.10e-21 40 391 77 409
polygalacturonase ADPG
215120 PLN02188 1.30e-20 3 391 6 375
polygalacturonase/glycoside hydrolase family protein
215426 PLN02793 1.14e-16 130 390 149 394
Probable polygalacturonase
215540 PLN03010 1.18e-16 40 426 56 408
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.90e-288 1 429 35 463
3.90e-288 1 429 35 463
7.30e-264 76 429 1 354
7.30e-264 76 429 1 354
8.15e-172 30 429 19 421

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.95e-32 29 416 14 383
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]
2.24e-08 82 397 41 338
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.93e-289 1 429 1 429
Alpha-L-rhamnosidase rgxB OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxB PE=2 SV=2
4.15e-71 12 408 13 430
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger OX=5061 GN=rgxA PE=2 SV=1
8.20e-71 11 408 12 430
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxA PE=2 SV=2
8.51e-66 34 415 31 435
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rgxA PE=3 SV=2
8.51e-66 34 415 31 435
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rgxA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000194 0.999781 CS pos: 20-21. Pr: 0.9881

TMHMM  Annotations      help

There is no transmembrane helices in AKAW_10051-t41_1-p1.