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CAZyme Information: AKAW_09287-t41_1-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Aspergillus luchuensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus luchuensis | |||||||||||
| CAZyme ID | AKAW_09287-t41_1-p1 | |||||||||||
| CAZy Family | GH92 | |||||||||||
| CAZyme Description | rhamnogalacturonase (RhgA) | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.171:11 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 78 | 355 | 4.5e-40 | 0.916923076923077 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 215540 | PLN03010 | 2.05e-14 | 40 | 358 | 48 | 392 | polygalacturonase |
| 395231 | Glyco_hydro_28 | 3.61e-12 | 146 | 353 | 85 | 313 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 165802 | PLN02155 | 3.89e-12 | 32 | 357 | 21 | 380 | polygalacturonase |
| 215120 | PLN02188 | 1.10e-11 | 29 | 355 | 27 | 390 | polygalacturonase/glycoside hydrolase family protein |
| 177865 | PLN02218 | 1.24e-11 | 35 | 287 | 64 | 339 | polygalacturonase ADPG |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 9.56e-310 | 1 | 429 | 1 | 446 | |
| 2.25e-308 | 1 | 429 | 1 | 446 | |
| 3.06e-306 | 1 | 429 | 1 | 446 | |
| 6.58e-242 | 1 | 423 | 1 | 439 | |
| 6.58e-242 | 1 | 423 | 1 | 439 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.12e-239 | 19 | 423 | 1 | 421 | Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus] |
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| 3.77e-18 | 26 | 361 | 9 | 351 | Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.00e-309 | 1 | 429 | 1 | 446 | Probable rhamnogalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgA PE=3 SV=1 |
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| 5.44e-307 | 1 | 429 | 1 | 446 | Rhamnogalacturonase A OS=Aspergillus niger OX=5061 GN=rhgA PE=1 SV=1 |
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| 1.17e-242 | 1 | 423 | 1 | 439 | Rhamnogalacturonase A OS=Aspergillus aculeatus OX=5053 GN=rhgA PE=1 SV=1 |
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| 4.93e-237 | 7 | 425 | 6 | 441 | Rhamnogalacturonase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rhgA PE=2 SV=2 |
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| 3.44e-225 | 1 | 426 | 1 | 444 | Probable rhamnogalacturonase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rhgA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000256 | 0.999716 | CS pos: 18-19. Pr: 0.9812 |