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CAZyme Information: AKAW_08560-t41_1-p1

You are here: Home > Sequence: AKAW_08560-t41_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus luchuensis
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus luchuensis
CAZyme ID AKAW_08560-t41_1-p1
CAZy Family GH62
CAZyme Description pectinase 2
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
362 37603.84 4.8806
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AluchuensisIFO4308 11755 1033177 267 11488
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.15:80

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 40 356 1.7e-73 0.9753846153846154

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 1.75e-152 45 362 1 321
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
177865 PLN02218 2.55e-26 45 355 95 417
polygalacturonase ADPG
227721 Pgu1 1.12e-23 45 280 109 398
Polygalacturonase [Carbohydrate transport and metabolism].
215540 PLN03010 1.22e-23 81 355 120 388
polygalacturonase
215426 PLN02793 5.36e-21 45 353 80 406
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.36e-261 1 362 1 362
4.36e-261 1 362 1 362
3.58e-260 1 362 1 362
1.20e-258 1 362 1 362
1.23e-251 1 362 1 362

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.20e-248 1 362 1 362
Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger],1CZF_B Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger]
4.78e-174 24 362 5 344
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
4.78e-174 24 362 5 344
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
6.86e-172 29 362 2 336
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
2.77e-148 29 358 2 333
Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.75e-262 1 362 1 362
Probable endopolygalacturonase II OS=Aspergillus kawachii (strain NBRC 4308) OX=1033177 GN=pgaII PE=3 SV=2
2.13e-259 1 362 1 362
Endopolygalacturonase II OS=Aspergillus awamori OX=105351 GN=pgaII PE=1 SV=1
2.19e-252 1 362 1 362
Endopolygalacturonase II OS=Aspergillus niger OX=5061 PE=1 SV=1
2.19e-252 1 362 1 362
Endopolygalacturonase II OS=Aspergillus tubingensis OX=5068 GN=pgaII PE=1 SV=1
1.65e-247 1 362 1 362
Probable endopolygalacturonase II OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaII PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000248 0.999729 CS pos: 27-28. Pr: 0.8792

TMHMM  Annotations      help

There is no transmembrane helices in AKAW_08560-t41_1-p1.