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CAZyme Information: AKAW_07144-t41_1-p1

You are here: Home > Sequence: AKAW_07144-t41_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus luchuensis
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus luchuensis
CAZyme ID AKAW_07144-t41_1-p1
CAZy Family GH3
CAZyme Description pectinase 3
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
384 40426.25 3.8268
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AluchuensisIFO4308 11755 1033177 267 11488
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.15:80

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 60 382 1.1e-71 0.96

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 2.30e-124 63 382 1 321
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
177865 PLN02218 1.85e-22 114 376 157 420
polygalacturonase ADPG
178580 PLN03003 2.35e-22 120 376 118 375
Probable polygalacturonase At3g15720
227721 Pgu1 2.39e-22 99 384 183 524
Polygalacturonase [Carbohydrate transport and metabolism].
215426 PLN02793 5.09e-17 115 353 145 382
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.05e-279 1 384 1 384
3.05e-279 1 384 1 384
7.19e-278 1 384 1 384
6.06e-270 1 384 1 384
1.13e-267 1 384 1 383

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.77e-171 42 382 1 339
Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus]
8.98e-154 38 382 5 344
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
5.16e-153 38 382 5 344
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
2.11e-150 45 382 3 336
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
1.26e-139 43 382 1 336
Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.08e-270 1 384 1 384
Probable endopolygalacturonase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaC PE=3 SV=1
2.00e-268 1 384 1 383
Probable endopolygalacturonase C OS=Aspergillus niger OX=5061 GN=pgaC PE=3 SV=1
6.24e-254 1 384 1 384
Probable endopolygalacturonase C OS=Aspergillus aculeatus OX=5053 GN=pgaC PE=2 SV=1
6.02e-202 25 382 23 378
Probable endopolygalacturonase E OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaE PE=3 SV=1
8.55e-202 1 382 1 378
Endopolygalacturonase E OS=Aspergillus niger OX=5061 GN=pgaE PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000253 0.999732 CS pos: 19-20. Pr: 0.9849

TMHMM  Annotations      help

There is no transmembrane helices in AKAW_07144-t41_1-p1.