CAZyme Information: AKAW_03982-t41_1-p1

Basic Information

• Species: Aspergillus luchuensis
• Lineage: Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus luchuensis
• CAZyme ID: AKAW_03982-t41_1-p1
• CAZy Family: GH1
• CAZyme Description: rhamnogalacturonase E

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
450	DF126454|CGC3	48205.15	3.9001

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_AluchuensisIFO4308	11755	1033177	267	11488

• Gene Location: location=DF126454:709989-711513(+)

Full Sequence      

MTLSTSFLVATYLLSITNSVHAQLTGSVGPLTSVSDKAAVKTCNVLDYGASSDNTTDVGQ
PIIDAFADCGSGGLIYVPEGDYLLKNWVSLENGSAWAIQLDGVLYRDSSPSSQSYMFEIS
GGSDFELFSSNATGAIQGSGYLYHRDDTYTGPRMLHISDVSDWSVHDLVLVDSPMFHFVI
DGGYNGEVYNMAIRGADHGGLDGIDVYGDNMWIHDIMVTNKDECVTTKTNSHNFLIENIY
CNSSGGCAIGSLGSGANVSNIVYRNVYTWDSNQMMMIKSNGGSGDVSNVVFENFIGHGNA
YSLDLDSYWSSMDAIDGDGINYHNITFQNWTGTAVDGETRPPIRVICPEDTPCTEINLVQ
IDLWVEEGAYDEYVCKNAYGSGYCLDSATGTSTPYTTTTYVNTAPTGYEAPTMTDDLTTA
FGTSASIPIPTIPASFFPGVAPISALAGSS

Enzyme Prediction     

EC	3.2.1.171:11

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH28	68	379	1.7e-55	0.96

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
215540	PLN03010	7.74e-20	44	380	48	391	polygalacturonase
215426	PLN02793	3.26e-16	2	381	13	412	Probable polygalacturonase
177865	PLN02218	1.37e-15	39	378	64	418	polygalacturonase ADPG
395231	Glyco_hydro_28	3.87e-14	152	378	85	315	Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
165802	PLN02155	1.19e-11	44	380	29	380	polygalacturonase

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCS16489.1|GH28	0.0	1	450	1	450
BCS04927.1|GH28	0.0	1	450	1	450
ABD67156.1|GH28	0.0	1	450	1	450
ABD67158.1|GH28	1.63e-273	1	450	1	450
QMW44915.1|GH28	5.95e-241	4	450	3	449

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1RMG_A	1.65e-192	23	448	1	422	Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q1ZZM3|RHGE_ASPNG	0.0	1	450	1	450	Probable rhamnogalacturonase E OS=Aspergillus niger OX=5061 GN=rhgE PE=3 SV=1
sp|A2QXE8|RHGE_ASPNC	1.22e-270	1	450	1	448	Probable rhamnogalacturonase E OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgE PE=3 SV=2
sp|B8NKB9|RHGE_ASPFN	1.74e-240	4	450	3	449	Probable rhamnogalacturonase E OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rhgE PE=3 SV=2
sp|Q2U7A4|RHGE_ASPOR	4.38e-225	4	450	3	432	Probable rhamnogalacturonase E OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rhgE PE=3 SV=1
sp|Q00001|RHGA_ASPAC	5.64e-192	15	448	11	440	Rhamnogalacturonase A OS=Aspergillus aculeatus OX=5053 GN=rhgA PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000255	0.999705	CS pos: 22-23. Pr: 0.9765

TMHMM  Annotations     

There is no transmembrane helices in AKAW_03982-t41_1-p1.