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CAZyme Information: AKAW_01964-t41_1-p1

You are here: Home > Sequence: AKAW_01964-t41_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus luchuensis
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus luchuensis
CAZyme ID AKAW_01964-t41_1-p1
CAZy Family AA7
CAZyme Description pectin lyase C
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
373 39292.86 6.0275
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AluchuensisIFO4308 11755 1033177 267 11488
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.10:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 107 291 4.8e-75 0.9893048128342246

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
214765 Amb_all 1.29e-51 106 293 2 189
Amb_all domain.
366158 Pec_lyase_C 1.42e-10 111 290 23 211
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.
226384 PelB 5.14e-09 112 292 91 275
Pectate lyase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.32e-282 1 373 1 373
2.32e-282 1 373 1 373
1.06e-261 1 373 1 373
1.20e-259 1 373 1 373
5.90e-228 1 373 1 373

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.75e-117 21 373 3 359
Pectin Lyase A [Aspergillus niger]
2.30e-115 21 371 3 358
Pectin Lyase B [Aspergillus niger]
9.25e-115 21 373 3 359
Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger]
4.09e-07 147 306 111 273
Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O88_A Chain A, Pectate Lyase C [Dickeya chrysanthemi],1O8D_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8E_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8F_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8G_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8H_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8I_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8J_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8K_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8L_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8M_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1PLU_A Chain A, Protein (pectate Lyase C) [Dickeya chrysanthemi],2PEC_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi]
9.66e-07 147 306 111 273
Chain A, Pectate lyase C [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.89e-262 1 373 1 373
Probable pectin lyase C OS=Aspergillus niger OX=5061 GN=pelC PE=3 SV=1
2.13e-260 1 373 1 373
Probable pectin lyase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pelC PE=3 SV=1
3.15e-131 13 373 15 375
Probable pectin lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pelC PE=3 SV=1
3.15e-131 13 373 15 375
Probable pectin lyase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pelA PE=3 SV=1
6.98e-126 16 373 16 378
Probable pectin lyase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pelA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000337 0.999624 CS pos: 18-19. Pr: 0.8478

TMHMM  Annotations      help

There is no transmembrane helices in AKAW_01964-t41_1-p1.