dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: AKAW_01818-t41_1-p1

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Basic Information help

Species

Aspergillus luchuensis

Lineage

Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus luchuensis

CAZyme ID

AKAW_01818-t41_1-p1

CAZy Family

PL1

CAZyme Description

LysM domain protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
437	DF126450\|CGC4	46635.11	4.0189

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_AluchuensisIFO4308	11755	1033177	267	11488

Gene Location

Full Sequence Download help

Enzyme Prediction help

EC	-	-

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
180536	PRK06347	3.14e-13	126	417	312	576	1,4-beta-N-acetylmuramoylhydrolase.
180536	PRK06347	7.78e-10	120	276	385	514	1,4-beta-N-acetylmuramoylhydrolase.
212030	LysM	1.26e-08	234	278	1	45	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
212030	LysM	2.87e-07	146	190	2	45	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
197609	LysM	1.59e-06	146	192	1	44	Lysin motif.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start
3.50e-305	1	437	1	437
8.57e-205	1	437	1	383
3.95e-195	1	284	1	284
4.99e-86	30	437	23	437
3.69e-82	58	437	37	424

PDB Hits help

AKAW_01818-t41_1-p1 has no PDB hit.

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
2.72e-50	27	436	30	456	LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_05157 PE=1 SV=1
1.27e-18	45	203	31	190	LysM domain-containing protein ARB_03438 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_03438 PE=3 SV=1
4.15e-18	190	437	222	536	LysM domain-containing protein ARB_00327 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_00327 PE=3 SV=2
1.16e-13	132	280	254	406	LysM domain-containing protein ARB_01488 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_01488 PE=3 SV=1
3.10e-12	225	282	380	437	Probable peptidoglycan-N-acetylglucosamine deacetylase ARB_03699 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_03699 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000999	0.998976	CS pos: 17-18. Pr: 0.9639

TMHMM Annotations help

There is no transmembrane helices in AKAW_01818-t41_1-p1.