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CAZyme Information: AGR57_7410T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phanerochaete chrysosporium | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Basidiomycota; Agaricomycetes; ; Phanerochaetaceae; Phanerochaete; Phanerochaete chrysosporium | |||||||||||
| CAZyme ID | AGR57_7410T0-p1 | |||||||||||
| CAZy Family | GH89 | |||||||||||
| CAZyme Description | Glycoside Hydrolase Family 28 protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.67:7 | 3.2.1.-:2 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 44 | 396 | 1.2e-76 | 0.9569230769230769 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 9.71e-51 | 103 | 396 | 47 | 317 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215120 | PLN02188 | 1.35e-41 | 28 | 385 | 48 | 379 | polygalacturonase/glycoside hydrolase family protein |
| 215426 | PLN02793 | 5.96e-35 | 69 | 385 | 111 | 399 | Probable polygalacturonase |
| 215540 | PLN03010 | 2.51e-32 | 69 | 394 | 107 | 389 | polygalacturonase |
| 177865 | PLN02218 | 4.35e-30 | 28 | 367 | 79 | 393 | polygalacturonase ADPG |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.02e-103 | 21 | 406 | 54 | 434 | |
| 6.22e-103 | 21 | 406 | 58 | 440 | |
| 3.07e-102 | 15 | 404 | 61 | 447 | |
| 7.32e-102 | 21 | 404 | 50 | 431 | |
| 8.94e-102 | 15 | 405 | 62 | 449 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.28e-61 | 17 | 409 | 15 | 387 | Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
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| 2.91e-28 | 104 | 380 | 66 | 331 | Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
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| 2.33e-26 | 104 | 394 | 73 | 338 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 3.19e-26 | 104 | 394 | 73 | 338 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 9.16e-25 | 104 | 394 | 65 | 330 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.49e-100 | 16 | 405 | 51 | 437 | Exopolygalacturonase OS=Cochliobolus carbonum OX=5017 GN=PGX1 PE=3 SV=1 |
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| 3.89e-100 | 21 | 404 | 51 | 431 | Probable exopolygalacturonase X OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pgaX PE=3 SV=2 |
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| 3.89e-100 | 21 | 404 | 51 | 431 | Probable exopolygalacturonase X OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pgaX PE=3 SV=2 |
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| 5.50e-100 | 21 | 404 | 51 | 431 | Probable exopolygalacturonase X OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaX PE=3 SV=2 |
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| 1.05e-97 | 21 | 406 | 51 | 433 | Exopolygalacturonase X-1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaX-1 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000301 | 0.999675 | CS pos: 17-18. Pr: 0.9786 |