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CAZyme Information: AGR57_6655T0-p1

You are here: Home > Sequence: AGR57_6655T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phanerochaete chrysosporium
Lineage Basidiomycota; Agaricomycetes; ; Phanerochaetaceae; Phanerochaete; Phanerochaete chrysosporium
CAZyme ID AGR57_6655T0-p1
CAZy Family GH72
CAZyme Description polysaccharide lyase family 14 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
348 PchrRP-78_SC006|CGC6 36454.44 4.4005
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PchrysosporiumRP-78 13602 273507 0 13602
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in AGR57_6655T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL14 94 304 2.5e-90 0.9952380952380953

CDD Domains      help

AGR57_6655T0-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.73e-115 19 322 18 334
1.73e-115 19 322 18 334
2.45e-115 19 322 18 334
2.66e-105 90 320 2 234
1.82e-77 44 329 45 370

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.50e-33 90 304 51 270
Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai],5GMT_B Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai]
9.45e-07 97 304 39 240
Crystal structure of D-glucuronic acid-bound alginate lyase vAL-1 from Chlorella virus [Paramecium bursaria Chlorella virus CVK2],3GNE_A Crystal structure of alginate lyase vAL-1 from Chlorella virus [Paramecium bursaria Chlorella virus CVK2],3GNE_B Crystal structure of alginate lyase vAL-1 from Chlorella virus [Paramecium bursaria Chlorella virus CVK2],3IM0_A Crystal structure of Chlorella virus vAL-1 soaked in 200mM D-glucuronic acid, 10% PEG-3350, and 200mM glycine-NaOH (pH 10.0) [Paramecium bursaria Chlorella virus CVK2]

Swiss-Prot Hits      help

AGR57_6655T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000364 0.999596 CS pos: 19-20. Pr: 0.9759

TMHMM  Annotations      help

There is no transmembrane helices in AGR57_6655T0-p1.