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CAZyme Information: AGR57_5645T0-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Phanerochaete chrysosporium | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Basidiomycota; Agaricomycetes; ; Phanerochaetaceae; Phanerochaete; Phanerochaete chrysosporium | |||||||||||
| CAZyme ID | AGR57_5645T0-p1 | |||||||||||
| CAZy Family | GH5 | |||||||||||
| CAZyme Description | Glycoside Hydrolase Family 28 protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 79 | 412 | 1.2e-56 | 0.8738461538461538 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 4.62e-26 | 81 | 397 | 18 | 303 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215426 | PLN02793 | 6.90e-26 | 124 | 404 | 149 | 401 | Probable polygalacturonase |
| 177865 | PLN02218 | 2.76e-24 | 105 | 415 | 144 | 423 | polygalacturonase ADPG |
| 215120 | PLN02188 | 3.64e-20 | 210 | 403 | 203 | 380 | polygalacturonase/glycoside hydrolase family protein |
| 178580 | PLN03003 | 6.67e-20 | 124 | 397 | 119 | 357 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.38e-85 | 7 | 419 | 12 | 435 | |
| 4.75e-85 | 10 | 419 | 15 | 435 | |
| 1.02e-83 | 11 | 400 | 15 | 415 | |
| 1.02e-83 | 11 | 400 | 15 | 415 | |
| 1.02e-83 | 11 | 400 | 15 | 415 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.49e-23 | 37 | 421 | 30 | 383 | Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
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| 3.04e-21 | 74 | 374 | 42 | 308 | Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
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| 2.19e-13 | 11 | 411 | 7 | 352 | Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus] |
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| 1.59e-09 | 113 | 379 | 73 | 307 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.59e-09 | 113 | 379 | 73 | 307 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.24e-86 | 7 | 419 | 12 | 435 | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxA PE=2 SV=2 |
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| 8.43e-86 | 10 | 419 | 15 | 435 | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger OX=5061 GN=rgxA PE=2 SV=1 |
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| 1.81e-84 | 11 | 400 | 15 | 415 | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rgxA PE=3 SV=2 |
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| 1.81e-84 | 11 | 400 | 15 | 415 | Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rgxA PE=3 SV=1 |
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| 2.18e-58 | 1 | 399 | 3 | 397 | Putative galacturan 1,4-alpha-galacturonidase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxC PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000318 | 0.999660 | CS pos: 21-22. Pr: 0.6235 |