logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: AGR57_1647T0-p1

You are here: Home > Sequence: AGR57_1647T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phanerochaete chrysosporium
Lineage Basidiomycota; Agaricomycetes; ; Phanerochaetaceae; Phanerochaete; Phanerochaete chrysosporium
CAZyme ID AGR57_1647T0-p1
CAZy Family GH13
CAZyme Description Six-hairpin glycosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
389 41896.42 4.7113
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PchrysosporiumRP-78 13602 273507 0 13602
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in AGR57_1647T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH105 123 372 4.9e-32 0.7620481927710844

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
400034 Glyco_hydro_88 8.91e-16 132 344 90 300
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
226678 YesR 5.59e-13 131 382 96 357
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.76e-135 19 382 20 384
1.19e-89 26 379 40 391
1.19e-89 26 379 40 391
6.71e-89 26 379 40 391
1.07e-87 17 379 14 364

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.67e-06 151 371 147 372
Chain A, Putative cytoplasmic protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]

Swiss-Prot Hits      help

AGR57_1647T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000307 0.999669 CS pos: 17-18. Pr: 0.9565

TMHMM  Annotations      help

There is no transmembrane helices in AGR57_1647T0-p1.