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CAZyme Information: AGR57_12192T0-p1

You are here: Home > Sequence: AGR57_12192T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phanerochaete chrysosporium
Lineage Basidiomycota; Agaricomycetes; ; Phanerochaetaceae; Phanerochaete; Phanerochaete chrysosporium
CAZyme ID AGR57_12192T0-p1
CAZy Family AA5
CAZyme Description Chondroitin AC/alginate lyase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
679 PchrRP-78_SC013|CGC3 72975.07 5.0764
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PchrysosporiumRP-78 13602 273507 0 13602
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in AGR57_12192T0-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL38 281 531 4.6e-69 0.8745519713261649

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
398861 Alginate_lyase 2.96e-45 259 530 3 266
Alginate lyase. This family contains several bacterial alginate lyase proteins. Alginate is a family of 1-4-linked copolymers of beta -D-mannuronic acid (M) and alpha -L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyze the depolymerization of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end. This family adopts an all alpha fold.
223021 PHA03247 7.45e-04 131 279 311 448
large tegument protein UL36; Provisional
223021 PHA03247 0.004 124 282 2603 2770
large tegument protein UL36; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
9.42e-137 23 667 21 678
2.51e-133 7 667 5 721
1.29e-120 23 667 21 647
2.05e-84 283 576 108 402
6.52e-84 274 590 99 420

PDB Hits      help

AGR57_12192T0-p1 has no PDB hit.

Swiss-Prot Hits      help

AGR57_12192T0-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000274 0.999697 CS pos: 23-24. Pr: 0.9751

TMHMM  Annotations      help

There is no transmembrane helices in AGR57_12192T0-p1.