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CAZyme Information: AGR57_11042T0-p1

You are here: Home > Sequence: AGR57_11042T0-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phanerochaete chrysosporium
Lineage Basidiomycota; Agaricomycetes; ; Phanerochaetaceae; Phanerochaete; Phanerochaete chrysosporium
CAZyme ID AGR57_11042T0-p1
CAZy Family AA3
CAZyme Description ligninase precursor
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
372 39475.71 4.7643
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PchrysosporiumRP-78 13602 273507 0 13602
Gene Location Start: 1416538; End:1418110  Strand: +

Full Sequence      Download help

MAFKQLLAAL  SVALTLQVTQ  AAPNLDKRVA  CPDGVHTASN  AACCAWFPVL  DDIQQNLFHG60
GQCGAEAHEA  LRMVFHDSIA  ISPKLQSQGK  FGGGGADGSI  ITFSSIETTY  HPNIGLDEVV120
AIQKPFIAKH  GVTPGDFIAF  AGAVGVSNCP  GAPQMQFFLG  RPEATQAAPD  GLVPEPFHTI180
DQVLARMLDA  GGFDEIETVW  LLSAHSIAAA  NDVDPTISGL  PFDSTPGQFD  SQFFVETQLR240
GTAFPGKTGI  QGTVMSPLKG  EMRLQTDHLF  ARDSRTACEW  QSFVNNQTKL  QEDFQFIFTA300
LSTLGHDMNA  MIDCSEVIPA  PKPVNFGPSF  FPAGKTHADI  EQACASTPFP  TLITAPGPSA360
SVARIPPPPS  PN372

Enzyme Prediction      help

EC 1.11.1.14:8

CAZyme Signature Domains help

Created with Snap18375574931111301481671862042232412602792973163343531255AA2
Family Start End Evalue family coverage
AA2 46 307 2.5e-113 0.996078431372549

CDD Domains      download full data without filtering help

Created with Snap183755749311113014816718620422324126027929731633435329359ligninase290361Peroxidase_ext49294plant_peroxidase_like49286peroxidase71294secretory_peroxidase
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
173826 ligninase 0.0 29 359 1 327
Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
403189 Peroxidase_ext 1.22e-25 290 361 1 72
Fungal peroxidase extension region. This region is found as an extension to a haem peroxidase domain in some fungi. This region is about 80 amino acids in length and forms an extended structure on the surface of the peroxidase domain pfam00141.
173823 plant_peroxidase_like 1.30e-22 49 294 3 246
Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase.
395089 peroxidase 2.59e-20 49 286 1 187
Peroxidase.
173827 secretory_peroxidase 1.07e-05 71 294 37 271
Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.

CAZyme Hits      help

Created with Snap18375574931111301481671862042232412602792973163343531372AAA33733.1|AA2|1.11.1.141372CAA33621.1|AA2|1.11.1.141369AAA53109.1|AA21369P06181|AA2|1.11.1.141369CAA38178.1|AA2
Hit ID E-Value Query Start Query End Hit Start Hit End
AAA33733.1|AA2|1.11.1.14 1.10e-275 1 372 1 372
CAA33621.1|AA2|1.11.1.14 6.34e-275 1 372 1 372
AAA53109.1|AA2 8.05e-200 1 369 1 370
P06181|AA2|1.11.1.14 4.64e-199 1 369 1 370
CAA38178.1|AA2 6.59e-199 1 369 1 370

PDB Hits      download full data without filtering help

Created with Snap1837557493111130148167186204223241260279297316334353293721QPA_A253691B82_A253691B85_A253691B80_A253696A6Q_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
1QPA_A 4.45e-258 29 372 1 344
Chain A, Lignin Peroxidase [Phanerodontia chrysosporium],1QPA_B Chain B, Lignin Peroxidase [Phanerodontia chrysosporium]
1B82_A 1.06e-193 25 369 4 349
Chain A, PROTEIN (LIGNIN PEROXIDASE) [Phanerodontia chrysosporium],1B82_B Chain B, PROTEIN (LIGNIN PEROXIDASE) [Phanerodontia chrysosporium]
1B85_A 3.53e-192 25 369 4 349
Chain A, Ligninase H8 [Phanerodontia chrysosporium],1B85_B Chain B, Ligninase H8 [Phanerodontia chrysosporium]
1B80_A 7.12e-192 25 369 4 349
Chain A, PROTEIN (RECOMBINANT LIGNIN PEROXIDASE H8) [Phanerodontia chrysosporium],1B80_B Chain B, PROTEIN (RECOMBINANT LIGNIN PEROXIDASE H8) [Phanerodontia chrysosporium]
6A6Q_A 1.67e-190 25 369 4 349
Chain A, Ligninase H8 [Phanerochaete chrysosporium RP-78]

Swiss-Prot Hits      download full data without filtering help

Created with Snap18375574931111301481671862042232412602792973163343531372sp|P11542|LIG4_PHACH1369sp|P06181|LIG8_PHACH1369sp|P31838|LIGB_PHACH1369sp|P21764|LIG3_PHACH1367sp|P49012|LIG2_PHACH
Hit ID E-Value Query Start Query End Hit Start Hit End Description
sp|P11542|LIG4_PHACH 1.13e-275 1 372 1 372
Ligninase H2 OS=Phanerodontia chrysosporium OX=2822231 GN=GLG4 PE=1 SV=2
sp|P06181|LIG8_PHACH 8.25e-200 1 369 1 370
Ligninase H8 OS=Phanerodontia chrysosporium OX=2822231 GN=LPOA PE=1 SV=1
sp|P31838|LIGB_PHACH 1.17e-199 1 369 1 370
Ligninase B OS=Phanerodontia chrysosporium OX=2822231 GN=LIPB PE=1 SV=1
sp|P21764|LIG3_PHACH 2.36e-199 1 369 1 370
Ligninase LG3 OS=Phanerodontia chrysosporium OX=2822231 GN=GLG3 PE=2 SV=1
sp|P49012|LIG2_PHACH 8.80e-197 1 367 1 368
Ligninase LG2 OS=Phanerodontia chrysosporium OX=2822231 GN=GLG2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000187 0.999809 CS pos: 28-29. Pr: 0.7260

TMHMM  Annotations      help

There is no transmembrane helices in AGR57_11042T0-p1.