logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: AFUB_006520-T-p1

You are here: Home > Sequence: AFUB_006520-T-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aspergillus fumigatus
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Aspergillus; Aspergillus fumigatus
CAZyme ID AFUB_006520-T-p1
CAZy Family PL3
CAZyme Description Ortholog(s) have hydrolase activity, acting on glycosyl bonds activity and role in carbohydrate catabolic process
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
416 46347.23 7.6668
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_AfumigatusA1163 10106 451804 199 9907
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in AFUB_006520-T-p1.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 2.89e-17 166 278 92 207
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215540 PLN03010 1.30e-12 154 273 134 273
polygalacturonase
165802 PLN02155 5.25e-09 206 365 194 375
polygalacturonase
177865 PLN02218 6.78e-09 206 274 241 309
polygalacturonase ADPG
178580 PLN03003 8.73e-09 162 277 151 258
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.95e-143 13 379 10 423
4.95e-143 13 379 10 423
9.94e-143 14 379 11 423
9.94e-143 14 379 11 423
6.01e-137 9 379 9 425

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.58e-26 31 273 18 253
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.47e-169 1 379 1 423
Putative galacturan 1,4-alpha-galacturonidase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=rgxC PE=3 SV=1
1.77e-143 14 379 11 423
Putative galacturan 1,4-alpha-galacturonidase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxC PE=2 SV=1
2.41e-44 7 280 5 289
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger OX=5061 GN=rgxA PE=2 SV=1
6.56e-43 7 280 5 289
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxA PE=2 SV=2
8.73e-39 32 280 31 288
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rgxA PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000205 0.999744 CS pos: 20-21. Pr: 0.9829

TMHMM  Annotations      help

There is no transmembrane helices in AFUB_006520-T-p1.