dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: NKHU02000119|CGC1
Gene ID: RHZ53825.1
Location and strand information: 6015 - 19281 (-)
Family: GH3
Protein type: CAZyme
Protein description: unspecified product
Protein isoelectric point: 6.2130
Protein molecular weight: 398984.64
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: NKHU02000119|CGC1
Gene ID: RHZ53827.1
Location and strand information: 20535 - 22428 (-)
Family: 9.A.63.1.1
Protein type: TC
Protein description: unspecified product

Gene clsuter ID: NKHU02000119|CGC1
Gene ID: RHZ53828.1
Location and strand information: 22905 - 25670 (+)
Family: null
Protein type: null
Protein description: Ribosome-releasing factor 2, mitochondrial

Gene clsuter ID: NKHU02000119|CGC1
Gene ID: RHZ53829.1
Location and strand information: 25897 - 27399 (-)
Family: null
Protein type: null
Protein description: unspecified product

Gene clsuter ID: NKHU02000119|CGC1
Gene ID: RHZ53830.1
Location and strand information: 28337 - 29758 (-)
Family: null
Protein type: null
Protein description: unspecified product

Gene clsuter ID: NKHU02000119|CGC1
Gene ID: RHZ53831.1
Location and strand information: 30715 - 31840 (-)
Family: null
Protein type: null
Protein description: unspecified product

Gene clsuter ID: NKHU02000119|CGC1
Gene ID: RHZ53833.1
Location and strand information: 35911 - 39854 (-)
Family: 9.B.198.2.1
Protein type: TC
Protein description: unspecified product

Gene clsuter ID: NKHU02000119|CGC1
Gene ID: RHZ53835.1
Location and strand information: 43065 - 45970 (-)
Family: GH3
Protein type: CAZyme
Protein description: unspecified product
Protein isoelectric point: 5.3284
Protein molecular weight: 85209.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: NKHU02000119|CGC1
Gene ID: RHZ53836.1
Location and strand information: 47293 - 49869 (-)
Family: 2.A.7.25.5
Protein type: TC
Protein description: unspecified product

Gene clsuter ID: NKHU02000119|CGC1
Gene ID: RHZ53839.1
Location and strand information: 55426 - 58222 (+)
Family: 3.A.16.1.2
Protein type: TC
Protein description: unspecified product

Gene clsuter ID: NKHU02000119|CGC1
Gene ID: RHZ53840.1
Location and strand information: 58824 - 60747 (-)
Family: 3.A.1.121.4
Protein type: TC
Protein description: ABC transporter ATP-binding protein arb1

Gene clsuter ID: NKHU02000119|CGC1
Gene ID: RHZ53846.1
Location and strand information: 73937 - 76291 (+)
Family: none
Protein type: TF
Protein description: unspecified product

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
RHZ53825.1	unspecified product	CAZyme	6015	19281	-	GH3
RHZ53827.1	unspecified product	TC	20535	22428	-	9.A.63.1.1
RHZ53828.1	Ribosome-releasing factor 2, mitochondrial	null	22905	25670	+	GTP_EFTU\| GTP_EFTU_D2\| EFG_III\| EFG_C\| EFG_C
RHZ53829.1	unspecified product	null	25897	27399	-	ArfGap
RHZ53830.1	unspecified product	null	28337	29758	-	RRM_1\| RRM_1
RHZ53831.1	unspecified product	null	30715	31840	-	No domain
RHZ53833.1	unspecified product	TC	35911	39854	-	9.B.198.2.1
RHZ53835.1	unspecified product	CAZyme	43065	45970	-	GH3
RHZ53836.1	unspecified product	TC	47293	49869	-	2.A.7.25.5
RHZ53839.1	unspecified product	TC	55426	58222	+	3.A.16.1.2
RHZ53840.1	ABC transporter ATP-binding protein arb1	TC	58824	60747	-	3.A.1.121.4
RHZ53846.1	unspecified product	TF	73937	76291	+	none
Protein ID	Protein Name	Type	Start	End	Strand	Signature