dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: NKHU02000113|CGC1
Gene ID: RHZ54224.1
Location and strand information: 349 - 2084 (+)
Family: null
Protein type: null
Protein description: unspecified product

Gene clsuter ID: NKHU02000113|CGC1
Gene ID: RHZ54226.1
Location and strand information: 5400 - 7767 (+)
Family: AA3_1
Protein type: CAZyme
Protein description: unspecified product
Protein isoelectric point: 7.8031
Protein molecular weight: 82266.63
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: NKHU02000113|CGC1
Gene ID: RHZ54227.1
Location and strand information: 7960 - 8669 (-)
Family: null
Protein type: null
Protein description: unspecified product

Gene clsuter ID: NKHU02000113|CGC1
Gene ID: RHZ54230.1
Location and strand information: 12341 - 14430 (+)
Family: none
Protein type: TF
Protein description: unspecified product

Gene clsuter ID: NKHU02000113|CGC1
Gene ID: RHZ54231.1
Location and strand information: 14526 - 16466 (-)
Family: 2.A.1.14.38
Protein type: TC
Protein description: unspecified product

Gene clsuter ID: NKHU02000113|CGC1
Gene ID: RHZ54234.1
Location and strand information: 21961 - 23947 (-)
Family: 4.C.1.1.4
Protein type: TC
Protein description: unspecified product

Gene clsuter ID: NKHU02000113|CGC1
Gene ID: RHZ54237.1
Location and strand information: 43425 - 44733 (-)
Family: GH28
Protein type: CAZyme
Protein description: unspecified product
Protein isoelectric point: 4.1858
Protein molecular weight: 38435.37
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: NKHU02000113|CGC1
Gene ID: RHZ54238.1
Location and strand information: 45671 - 47806 (-)
Family: PL4_3
Protein type: CAZyme
Protein description: unspecified product
Protein isoelectric point: 6.1226
Protein molecular weight: 73264.32
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: NKHU02000113|CGC1
Gene ID: RHZ54246.1
Location and strand information: 70519 - 72117 (-)
Family: GT1
Protein type: CAZyme
Protein description: unspecified product
Protein isoelectric point: 8.6635
Protein molecular weight: 58643.04
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: NKHU02000113|CGC1
Gene ID: RHZ54250.1
Location and strand information: 85175 - 86094 (+)
Family: 9.A.26.1.3
Protein type: TC
Protein description: unspecified product

Gene clsuter ID: NKHU02000113|CGC1
Gene ID: RHZ54251.1
Location and strand information: 86184 - 88680 (-)
Family: none
Protein type: TF
Protein description: unspecified product

Protein ID	eCAMI subfam	CAZyme substrate
RHZ54226.1
RHZ54237.1	GH28_e75	pectin
RHZ54238.1	PL4_e1	pectin
RHZ54246.1	GT1_e208	-

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
RHZ54224.1	unspecified product	null	349	2084	+	Methyltr_RsmB-F\| Methyltr_RsmB-F
RHZ54226.1	unspecified product	CAZyme	5400	7767	+	AA3\| 1
RHZ54227.1	unspecified product	null	7960	8669	-	GST_N\| GST_C
RHZ54230.1	unspecified product	TF	12341	14430	+	none
RHZ54231.1	unspecified product	TC	14526	16466	-	2.A.1.14.38
RHZ54234.1	unspecified product	TC	21961	23947	-	4.C.1.1.4
RHZ54237.1	unspecified product	CAZyme	43425	44733	-	GH28
RHZ54238.1	unspecified product	CAZyme	45671	47806	-	PL4\| 3
RHZ54246.1	unspecified product	CAZyme	70519	72117	-	GT1
RHZ54250.1	unspecified product	TC	85175	86094	+	9.A.26.1.3
RHZ54251.1	unspecified product	TF	86184	88680	-	none
Protein ID	Protein Name	Type	Start	End	Strand	Signature