dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: KN848901|CGC3
Gene ID: I314_04743-t35_1-p1
Location and strand information: 111607 - 112439 (+)
Family: null
Protein type: null
Protein description: DNA-directed RNA polymerase I, II, and III subunit RPABC2

Gene clsuter ID: KN848901|CGC3
Gene ID: I314_04762-t35_1-p1
Location and strand information: 146346 - 148223 (-)
Family: GH79
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5290
Protein molecular weight: 57533.19
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: KN848901|CGC3
Gene ID: I314_04775-t35_1-p1
Location and strand information: 188121 - 194300 (-)
Family: null
Protein type: null
Protein description: RNA helicase

Gene clsuter ID: KN848901|CGC3
Gene ID: I314_04793-t35_1-p1
Location and strand information: 228387 - 230044 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: KN848901|CGC3
Gene ID: I314_04802-t35_1-p1
Location and strand information: 275364 - 280620 (-)
Family: Pkinase
Protein type: STP
Protein description: CMGC/DYRK/DYRK2 protein kinase

Gene clsuter ID: KN848901|CGC3
Gene ID: I314_04846-t35_1-p1
Location and strand information: 385835 - 387944 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: KN848901|CGC3
Gene ID: I314_04878-t35_1-p1
Location and strand information: 454282 - 456048 (-)
Family: 3.A.16.1.2
Protein type: TC
Protein description: vacuolar protein-sorting-associated protein 4

Gene clsuter ID: KN848901|CGC3
Gene ID: I314_04883-t35_1-p1
Location and strand information: 463373 - 465175 (+)
Family: 1.I.1.1.3
Protein type: TC
Protein description: CMGC/MAPK protein kinase

Gene clsuter ID: KN848901|CGC3
Gene ID: I314_04884-t35_1-p1
Location and strand information: 465498 - 467343 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: KN848901|CGC3
Gene ID: I314_04945-t35_1-p1
Location and strand information: 608746 - 610890 (-)
Family: 2.A.1.25.6
Protein type: TC
Protein description: acetyl-CoA transporter

Gene clsuter ID: KN848901|CGC3
Gene ID: I314_04957-t35_1-p1
Location and strand information: 649533 - 651943 (+)
Family: 2.A.1.1.40
Protein type: TC
Protein description: monosaccharide transporter

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
I314_04743-t35_1-p1	DNA-directed RNA polymerase I, II, and III subunit RPABC2	null	111607	112439	+	RNA_pol_Rpb6
I314_04762-t35_1-p1	hypothetical protein	CAZyme	146346	148223	-	GH79
I314_04775-t35_1-p1	RNA helicase	null	188121	194300	-	DEAD\| Helicase_C\| Sec63\| DEAD
I314_04793-t35_1-p1	hypothetical protein	null	228387	230044	-	WD40
I314_04802-t35_1-p1	CMGC/DYRK/DYRK2 protein kinase	STP	275364	280620	-	Pkinase
I314_04846-t35_1-p1	hypothetical protein	null	385835	387944	+	LRR_8
I314_04878-t35_1-p1	vacuolar protein-sorting-associated protein 4	TC	454282	456048	-	3.A.16.1.2
I314_04883-t35_1-p1	CMGC/MAPK protein kinase	TC	463373	465175	+	1.I.1.1.3
I314_04884-t35_1-p1	hypothetical protein	null	465498	467343	+	No domain
I314_04945-t35_1-p1	acetyl-CoA transporter	TC	608746	610890	-	2.A.1.25.6
I314_04957-t35_1-p1	monosaccharide transporter	TC	649533	651943	+	2.A.1.1.40
Protein ID	Protein Name	Type	Start	End	Strand	Signature