dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: KE124098|CGC1
Gene ID: HMPREF1544_10446-t46_1-p1
Location and strand information: 54 - 435 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: KE124098|CGC1
Gene ID: HMPREF1544_10447-t46_1-p1
Location and strand information: 1713 - 3272 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: KE124098|CGC1
Gene ID: HMPREF1544_10449-t46_1-p1
Location and strand information: 11350 - 12831 (-)
Family: 1.I.1.1.3
Protein type: TC
Protein description: CMGC/GSK protein kinase

Gene clsuter ID: KE124098|CGC1
Gene ID: HMPREF1544_10453-t46_1-p1
Location and strand information: 24285 - 24863 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: KE124098|CGC1
Gene ID: HMPREF1544_10456-t46_1-p1
Location and strand information: 26663 - 27457 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: KE124098|CGC1
Gene ID: HMPREF1544_10459-t46_1-p1
Location and strand information: 35307 - 36422 (-)
Family: Homeobox
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: KE124098|CGC1
Gene ID: HMPREF1544_10462-t46_1-p1
Location and strand information: 42051 - 45189 (+)
Family: GT39
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.4818
Protein molecular weight: 101480.21
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: KE124098|CGC1
Gene ID: HMPREF1544_10463-t46_1-p1
Location and strand information: 45396 - 46070 (+)
Family: 8.A.63.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: KE124098|CGC1
Gene ID: HMPREF1544_10464-t46_1-p1
Location and strand information: 48324 - 49326 (-)
Family: 3.A.2.2.4
Protein type: TC
Protein description: ATP synthase (E/31 kDa) subunit

Gene clsuter ID: KE124098|CGC1
Gene ID: HMPREF1544_10466-t46_1-p1
Location and strand information: 53139 - 54369 (-)
Family: GT15
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.9167
Protein molecular weight: 38237.51
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: KE124098|CGC1
Gene ID: HMPREF1544_10468-t46_1-p1
Location and strand information: 58316 - 61436 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
HMPREF1544_10446-t46_1-p1	hypothetical protein	null	54	435	+	No domain
HMPREF1544_10447-t46_1-p1	hypothetical protein	null	1713	3272	-	No domain
HMPREF1544_10449-t46_1-p1	CMGC/GSK protein kinase	TC	11350	12831	-	1.I.1.1.3
HMPREF1544_10453-t46_1-p1	hypothetical protein	null	24285	24863	+	No domain
HMPREF1544_10456-t46_1-p1	hypothetical protein	null	26663	27457	-	No domain
HMPREF1544_10459-t46_1-p1	hypothetical protein	TF	35307	36422	-	Homeobox
HMPREF1544_10462-t46_1-p1	hypothetical protein	CAZyme	42051	45189	+	GT39
HMPREF1544_10463-t46_1-p1	hypothetical protein	TC	45396	46070	+	8.A.63.1.3
HMPREF1544_10464-t46_1-p1	ATP synthase (E/31 kDa) subunit	TC	48324	49326	-	3.A.2.2.4
HMPREF1544_10466-t46_1-p1	hypothetical protein	CAZyme	53139	54369	-	GT15
HMPREF1544_10468-t46_1-p1	hypothetical protein	null	58316	61436	+	PLDc\| PLDc_2
Protein ID	Protein Name	Type	Start	End	Strand	Signature