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CAZyme Gene Cluster: JAFJYM010000009|CGC3
CGC gene composition diagram |
Gene composition table |
Substrate predicted by eCAMI subfamily |
Substrate predicted by dbCAN-PUL search |
Genomic context
CGC gene composition diagram
Gene composition table
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
|---|---|---|---|---|---|---|
| KAG6620858.1 | Copia protein
|
null | 173034 | 174227 | - | Retrotran_gag_2 |
| KAG6620773.1 | pectate lyase
|
CAZyme | 745681 | 747912 | + | PL3| 2|PL3| 2 |
| KAG6620810.1 | Cysteine desulfurase
|
STP | 762889 | 765084 | + | Aminotran_1_2 |
| KAG6620880.1 | serine/threonine protein kinase
|
TC | 885131 | 887323 | - | 3.A.5.9.1 |
| KAG6620759.1 | Pectate lyase
|
CAZyme | 1009907 | 1011145 | - | PL1| 4 |
| Protein ID | Protein Name | Type | Start | End | Strand | Signature |
Substrate predicted by eCAMI subfamilies is pectin
| Protein ID | eCAMI subfam | CAZyme substrate |
|---|---|---|
| KAG6620773.1 | PL3_e16 | pectin |
| KAG6620759.1 | PL1_e43 | pectin |