dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: GL985074|CGC3
Gene ID: TRIREDRAFT_66726-t26_1-p1
Location and strand information: 5594 - 7167 (-)
Family: AA7
Protein type: CAZyme
Protein description: predicted protein
Protein isoelectric point: 5.2061
Protein molecular weight: 51811.03
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: GL985074|CGC3
Gene ID: TRIREDRAFT_123198-t26_1-p1
Location and strand information: 67934 - 69298 (+)
Family: 3.D.10.1.6
Protein type: TC
Protein description: succinate dehydrogenase

Gene clsuter ID: GL985074|CGC3
Gene ID: TRIREDRAFT_123205-t26_1-p1
Location and strand information: 127479 - 129504 (+)
Family: null
Protein type: null
Protein description: predicted protein

Gene clsuter ID: GL985074|CGC3
Gene ID: TRIREDRAFT_66687-t26_1-p1
Location and strand information: 226345 - 227457 (-)
Family: GT17
Protein type: CAZyme
Protein description: glycosyltransferase family 17
Protein isoelectric point: 7.2346
Protein molecular weight: 42812.50
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: GL985074|CGC3
Gene ID: TRIREDRAFT_110225-t26_1-p1
Location and strand information: 322774 - 323520 (-)
Family: null
Protein type: null
Protein description: predicted protein

Gene clsuter ID: GL985074|CGC3
Gene ID: TRIREDRAFT_123258-t26_1-p1
Location and strand information: 446396 - 447594 (-)
Family: 9.A.60.1.1
Protein type: TC
Protein description: small GTPase rho3

Gene clsuter ID: GL985074|CGC3
Gene ID: TRIREDRAFT_66827-t26_1-p1
Location and strand information: 506072 - 507283 (+)
Family: null
Protein type: null
Protein description: predicted protein

Gene clsuter ID: GL985074|CGC3
Gene ID: TRIREDRAFT_80645-t26_1-p1
Location and strand information: 566361 - 568500 (-)
Family: null
Protein type: null
Protein description: predicted protein

Gene clsuter ID: GL985074|CGC3
Gene ID: TRIREDRAFT_30214-t26_1-p1
Location and strand information: 630781 - 631839 (+)
Family: null
Protein type: null
Protein description: predicted protein

Gene clsuter ID: GL985074|CGC3
Gene ID: TRIREDRAFT_110330-t26_1-p1
Location and strand information: 636367 - 637172 (+)
Family: null
Protein type: null
Protein description: predicted protein

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
TRIREDRAFT_66726-t26_1-p1	predicted protein	CAZyme	5594	7167	-	AA7
TRIREDRAFT_123198-t26_1-p1	succinate dehydrogenase	TC	67934	69298	+	3.D.10.1.6
TRIREDRAFT_123205-t26_1-p1	predicted protein	null	127479	129504	+	No domain
TRIREDRAFT_66687-t26_1-p1	glycosyltransferase family 17	CAZyme	226345	227457	-	GT17
TRIREDRAFT_110225-t26_1-p1	predicted protein	null	322774	323520	-	Flavin_Reduct
TRIREDRAFT_123258-t26_1-p1	small GTPase rho3	TC	446396	447594	-	9.A.60.1.1
TRIREDRAFT_66827-t26_1-p1	predicted protein	null	506072	507283	+	ADH_N\| ADH_zinc_N
TRIREDRAFT_80645-t26_1-p1	predicted protein	null	566361	568500	-	Amidase
TRIREDRAFT_30214-t26_1-p1	predicted protein	null	630781	631839	+	Caps_synth
TRIREDRAFT_110330-t26_1-p1	predicted protein	null	636367	637172	+	No domain
Protein ID	Protein Name	Type	Start	End	Strand	Signature