dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: ABDF02000079|CGC1
Gene ID: TRIVIDRAFT_49025-t45_1-p1
Location and strand information: 47892 - 49215 (+)
Family: CE8
Protein type: CAZyme
Protein description: carbohydrate esterase family 8 protein
Protein isoelectric point: 7.3181
Protein molecular weight: 43385.67
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: ABDF02000079|CGC1
Gene ID: TRIVIDRAFT_154339-t45_1-p1
Location and strand information: 108602 - 110289 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: ABDF02000079|CGC1
Gene ID: TRIVIDRAFT_69036-t45_1-p1
Location and strand information: 227993 - 229209 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: ABDF02000079|CGC1
Gene ID: TRIVIDRAFT_192759-t45_1-p1
Location and strand information: 283041 - 285759 (+)
Family: GH3
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.8296
Protein molecular weight: 91451.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: ABDF02000079|CGC1
Gene ID: TRIVIDRAFT_48997-t45_1-p1
Location and strand information: 302832 - 304661 (+)
Family: GH79
Protein type: CAZyme
Protein description: glycoside hydrolase family 79 protein
Protein isoelectric point: 6.3679
Protein molecular weight: 57753.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: ABDF02000079|CGC1
Gene ID: TRIVIDRAFT_223898-t45_1-p1
Location and strand information: 461334 - 463314 (+)
Family: 2.A.1.3.12
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: ABDF02000079|CGC1
Gene ID: TRIVIDRAFT_154597-t45_1-p1
Location and strand information: 526558 - 527883 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: ABDF02000079|CGC1
Gene ID: TRIVIDRAFT_77631-t45_1-p1
Location and strand information: 587050 - 588292 (-)
Family: 3.D.4.8.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: ABDF02000079|CGC1
Gene ID: TRIVIDRAFT_69153-t45_1-p1
Location and strand information: 617291 - 619450 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
TRIVIDRAFT_49025-t45_1-p1	carbohydrate esterase family 8 protein	CAZyme	47892	49215	+	CE8
TRIVIDRAFT_154339-t45_1-p1	hypothetical protein	null	108602	110289	-	Aa_trans
TRIVIDRAFT_69036-t45_1-p1	hypothetical protein	null	227993	229209	-	ADH_N\| ADH_zinc_N
TRIVIDRAFT_192759-t45_1-p1	hypothetical protein	CAZyme	283041	285759	+	GH3
TRIVIDRAFT_48997-t45_1-p1	glycoside hydrolase family 79 protein	CAZyme	302832	304661	+	GH79
TRIVIDRAFT_223898-t45_1-p1	hypothetical protein	TC	461334	463314	+	2.A.1.3.12
TRIVIDRAFT_154597-t45_1-p1	hypothetical protein	null	526558	527883	+	WD40\| WD40
TRIVIDRAFT_77631-t45_1-p1	hypothetical protein	TC	587050	588292	-	3.D.4.8.1
TRIVIDRAFT_69153-t45_1-p1	hypothetical protein	null	617291	619450	-	Ferric_reduct\| FAD_binding_8
Protein ID	Protein Name	Type	Start	End	Strand	Signature