Seed protein information help
| APIS family ID | LockinC | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Inhibited defense system | Type I Thoeris | |||||||||||||
| CLAN ID | CLAN003 | |||||||||||||
| Seed protein property |
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| Phage property |
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| PMID/References | PMID:41785351 | |||||||||||||
| PDB structures | ; | |||||||||||||
| Pfam domains | PF26760 | |||||||||||||
| Phrog | phrog_2998,phrog_6518,phrog_6102,phrog_770,phrog_2729 | |||||||||||||
| Host taxa | wetland metagenome | |||||||||||||
| Gene Location | Start: 6691; End: 6993; Strand: + | |||||||||||||
| Description | Lockin-family sponge protein; inhibits type I Thoeris by trapping 3′cADPR. | |||||||||||||
Seed genomic context Download table help
| Genome accession | Start | End | Strand | Protein ID | Length | Molecular weight | Charge | Isoelectric point | Function | Phrog | PFAM |
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Seed genomic context- JBrowse
Predicted 3D structure by alphafold2 with pTM = 0.75 Download help
pTM is for the estimate of the TM-score, which is obtained from a pairwise error prediction. The higher pTM score indicates better model quality.
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .