No AFmodels/MGV-GENOME-0303377_11-plddt.txt found dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID APIS379
Inhibited defense system
CLAN ID CLAN028
Seed protein property
Accession ID Gene name Protein length Molecular weight Isoelectric point Charge
MGV-GENOME-0303377_11
gene_page: 303 35508.5 8.4285 8.5
Phage property
Phage Assembly id
PMID/References
PDB structures ;
Pfam domains
Phrog phrog_31,phrog_4527,phrog_38,phrog_1204,phrog_262
Host taxa
Gene Location Start: ;  End: ;  Strand: 
Description
Note This family does not have seed protein, but we infer its function is defending restriction-modification (RM) because it belongs to the same clan as family APIS204 which has seed protein.

Full Sequence
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;      Download help

Family information      Download help

Fam ID Seed protein Member count Model Alignment
APIS379 MGV-GENOME-0303377_11 4 HMM model Member alignment

Host Taxa distribution

Length distribution

Length Distribution Bar chart

Homology to other families       help

Clan ID: CLAN028

APIS379 has no similar APIS family.

Family members, sources, and their hosts        help

Results of representative protein blast against members.

Member pident evalue bitscore qcovs phage host SourceDB Pfam Phrog
MGV-GENOME-0303377_11 100.000 7.978E-207 631 1.000% MGV phrog_31 phrog_4527 phrog_38 phrog_1204 phrog_262
MGV-GENOME-0345758_63 98.000 9.932E-206 628 0.997% MGV phrog_31 phrog_4527 phrog_38 phrog_1204 phrog_262
IMGVR_UViG_3300045988_073134|3300045988|Ga0495776_014772_48551_49462 98.000 9.932E-206 628 0.997% Peptostreptococcaceae IMGVR phrog_31 phrog_4527 phrog_38 phrog_1204 phrog_262
uvig_44764_11 98.500 5.821E-207 632 0.997% GPD phrog_31 phrog_4527 phrog_38 phrog_1204 phrog_262