dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS367

Inhibited defense system

CLAN ID

CLAN002

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300048606_000068\|3300048606\|Ga0502575_0000227_8169_8681	gene_page:	170	18856.9	4.472	-9

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF26761

Phrog

phrog_1980,phrog_595,phrog_617,phrog_106,phrog_2998

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending Type I CBASS because it belongs to the same clan as family APIS287,APIS361 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS367	IMGVR_UViG_3300048606_000068\|3300048606\|Ga0502575_0000227_8169_8681	4	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN002

APIS367 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	SourceDB	Pfam	Phrog
IMGVR_UViG_3300048606_000068\|3300048606\|Ga0502575_0000227_8169_8681	100.000	7.649E-121	376	1.000%	IMGVR	PF26761	phrog_1980 phrog_595 phrog_617 phrog_106 phrog_2998
IMGVR_UViG_3300036402_000119\|3300036402\|Ga0372949_0013351_3281_3745	58.800	2.331E-58	196	1.000%	IMGVR	PF26761	phrog_1980 phrog_595 phrog_617 phrog_106 phrog_2998
IMGVR_UViG_3300046660_000705\|3300046660\|Ga0495625_0010769_4435_4926	44.100	7.825E-38	136	1.000%	IMGVR	PF26761	phrog_1980 phrog_595 phrog_617 phrog_106 phrog_2998
IMGVR_UViG_3300047320_000145\|3300047320\|Ga0495672_0004069_5888_6394	63.700	3.306E-65	215	1.000%	IMGVR	PF26761	phrog_1980 phrog_595 phrog_617 phrog_106 phrog_2998