dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS346

Inhibited defense system

CLAN ID

CLAN012

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300037418_002225\|3300037418\|Ga0395900_0002253_1325_1765	gene_page:	146	15837	8.5449	4

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF10686

Phrog

phrog_5616,phrog_864,phrog_2051,phrog_2244,phrog_1047

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending AVAST type III because it belongs to the same clan as family APIS354 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS346	IMGVR_UViG_3300037418_002225\|3300037418\|Ga0395900_0002253_1325_1765	19	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN012

APIS346 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	host	SourceDB	Pfam	Phrog
IMGVR_UViG_3300037418_002225\|3300037418\|Ga0395900_0002253_1325_1765	100.000	3.211E-97	306	1.000%		IMGVR	PF10686	phrog_5616 phrog_864 phrog_2051 phrog_2244 phrog_1047
IMGVR_UViG_3300010045_000009\|3300010045\|Ga0126311_1000021238	53.700	5.852E-29	109	0.719%		IMGVR	PF10686	phrog_5616 phrog_864 phrog_2051 phrog_2244 phrog_1047
IMGVR_UViG_3300033475_001096\|3300033475\|Ga0310811_100138694	50.500	8.019E-29	109	0.774%		IMGVR	PF10686	phrog_5616 phrog_864 phrog_2051 phrog_2244 phrog_1047
IMGVR_UViG_3300027889_000001\|3300027889\|Ga0209380_10000037112	56.200	7.823E-32	118	0.733%		IMGVR	PF10686	phrog_5616 phrog_864 phrog_2051 phrog_2244 phrog_1047
IMGVR_UViG_3300005921_000001\|3300005921\|Ga0070766_1000001973	56.200	7.823E-32	118	0.733%		IMGVR	PF10686	phrog_5616 phrog_864 phrog_2051 phrog_2244 phrog_1047
IMGVR_UViG_3300021233_000146\|3300021233\|Ga0223645_10084908	55.100	4.584E-33	121	0.774%		IMGVR	PF10686	phrog_5616 phrog_864 phrog_2051 phrog_2244 phrog_1047
IMGVR_UViG_3300007712_000002\|3300007712\|Ga0102929_1000009116	39.200	6.055E-17	75	0.726%		IMGVR	PF10686	phrog_5616 phrog_864 phrog_2051 phrog_2244 phrog_1047
IMGVR_UViG_3300002461_000197\|3300002461\|AADWTP_100018262	54.000	1.072E-31	117	0.767%		IMGVR	PF10686	phrog_5616 phrog_864 phrog_2051 phrog_2244 phrog_1047
IMGVR_UViG_3300002231_003535\|3300002231\|KVRMV2_10011754110	52.500	2.506E-30	113	0.767%		IMGVR	PF10686	phrog_5616 phrog_864 phrog_2051 phrog_2244 phrog_1047
IMGVR_UViG_3300036828_000849\|3300036828\|Ga0376666_0007280_6089_6433	61.000	1.729E-36	131	0.740%		IMGVR	PF10686	phrog_5616 phrog_864 phrog_2051 phrog_2244 phrog_1047
IMGVR_UViG_3300045391_002160\|3300045391\|Ga0438458_00026687_675_1010	56.600	7.823E-32	118	0.726%		IMGVR	PF10686	phrog_5616 phrog_864 phrog_2051 phrog_2244 phrog_1047
IMGVR_UViG_3300021432_000009\|3300021432\|Ga0210384_1000046323	52.600	9.736E-31	115	0.774%		IMGVR	PF10686	phrog_5616 phrog_864 phrog_2051 phrog_2244 phrog_1047
IMGVR_UViG_3300021170_000069\|3300021170\|Ga0210400_100014312	52.000	3.873E-28	107	0.733%		IMGVR	PF10686	phrog_5616 phrog_864 phrog_2051 phrog_2244 phrog_1047
IMGVR_UViG_3300045284_000107\|3300045284\|Ga0467014_0000106_15591_15959	50.800	1.072E-31	117	0.829%		IMGVR	PF10686	phrog_5616 phrog_864 phrog_2051 phrog_2244 phrog_1047
IMGVR_UViG_3300038456_000209\|3300038456\|Ga0436654_015435_3030_3386	52.000	3.873E-28	107	0.733%		IMGVR	PF10686	phrog_5616 phrog_864 phrog_2051 phrog_2244 phrog_1047
IMGVR_UViG_3300019886_000049\|3300019886\|Ga0193727_10029692	54.300	2.440E-33	122	0.795%		IMGVR	PF10686	phrog_5616 phrog_864 phrog_2051 phrog_2244 phrog_1047
IMGVR_UViG_3300021475_000001\|3300021475\|Ga0210392_1000005270	54.400	2.217E-32	119	0.767%		IMGVR	PF10686	phrog_5616 phrog_864 phrog_2051 phrog_2244 phrog_1047
IMGVR_UViG_3300047175_000107\|3300047175\|Ga0495344_0001962_13727_14149	45.900	1.556E-22	91	0.726%	Firmicutes	IMGVR	PF10686	phrog_5616 phrog_864 phrog_2051 phrog_2244 phrog_1047
IMGVR_UViG_3300033070_001355\|3300033070\|Ga0364486_1008417	46.100	8.182E-26	100	0.801%		IMGVR	PF10686	phrog_5616 phrog_864 phrog_2051 phrog_2244 phrog_1047