No AFmodels/IMGVR_UViG_3300028483_000017|3300028483|Ga0233377_100035333-plddt.txt found dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID APIS337
Inhibited defense system
CLAN ID CLAN002
Seed protein property
Accession ID Gene name Protein length Molecular weight Isoelectric point Charge
IMGVR_UViG_3300028483_000017|3300028483|Ga0233377_100035333
gene_page: 141 15201.1 5.1566 -3.5
Phage property
Phage Assembly id
PMID/References
PDB structures ;
Pfam domains PF26761
Phrog phrog_11,phrog_45,phrog_148,phrog_8841,phrog_3004
Host taxa
Gene Location Start: ;  End: ;  Strand: 
Description
Note This family does not have seed protein, but we infer its function is defending Type I CBASS because it belongs to the same clan as family APIS287,APIS361 which has seed protein.

Full Sequence
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;      Download help

Family information      Download help

Fam ID Seed protein Member count Model Alignment
APIS337 IMGVR_UViG_3300028483_000017|3300028483|Ga0233377_100035333 3 HMM model Member alignment

Host Taxa distribution

Length distribution

Length Distribution Bar chart

Homology to other families       help

Clan ID: CLAN002

APIS337 has no similar APIS family.

Family members, sources, and their hosts        help

Results of representative protein blast against members.

Member pident evalue bitscore qcovs phage host SourceDB Pfam Phrog
IMGVR_UViG_3300028483_000017|3300028483|Ga0233377_100035333 100.000 1.911E-94 298 1.000% IMGVR PF26761 phrog_11 phrog_45 phrog_148 phrog_8841 phrog_3004
IMGVR_UViG_3300011426_000173|3300011426|Ga0151147_144536920 99.200 1.911E-94 298 1.000% IMGVR PF26761 phrog_11 phrog_45 phrog_148 phrog_8841 phrog_3004
IMGVR_UViG_2645728039_000001|2645728039|2648052138 75.600 1.135E-61 203 0.922% Nocardia arizonensis IMGVR PF26761 phrog_11 phrog_45 phrog_148 phrog_8841 phrog_3004