dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS328

Inhibited defense system

CLAN ID

CLAN002

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300049491_000066\|3300049491\|Ga0499963_000568_14385_14759	gene_page:	124	13482	4.8732	-4.5

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF26761

Phrog

phrog_5749,phrog_2662,phrog_2998,phrog_45,phrog_1146

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending Type I CBASS because it belongs to the same clan as family APIS287,APIS361 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS328	IMGVR_UViG_3300049491_000066\|3300049491\|Ga0499963_000568_14385_14759	3	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN002

APIS328 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	SourceDB	Pfam	Phrog
IMGVR_UViG_3300049491_000066\|3300049491\|Ga0499963_000568_14385_14759	100.000	5.220E-83	264	1.000%	IMGVR	PF26761	phrog_5749 phrog_2662 phrog_2998 phrog_45 phrog_1146
IMGVR_UViG_3300036782_000067\|3300036782\|Ga0376654_0001122_554_991	44.600	1.174E-25	99	0.911%	IMGVR	PF26761	phrog_5749 phrog_2662 phrog_2998 phrog_45 phrog_1146
IMGVR_UViG_3300045120_000268\|3300045120\|Ga0467015_0000135_25964_26446	46.800	5.188E-24	94	0.863%	IMGVR	PF26761	phrog_5749 phrog_2662 phrog_2998 phrog_45 phrog_1146