dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS320

Inhibited defense system

CLAN ID

CLAN021

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300006190_000247\|3300006190\|Ga0075446_1000239514	gene_page:	158	18885.4	6.8647	1

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF26880

Phrog

phrog_2662,phrog_6090,phrog_67,phrog_4871,phrog_3956

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending Kongming because it belongs to the same clan as family APIS279,APIS286 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS320	IMGVR_UViG_3300006190_000247\|3300006190\|Ga0075446_1000239514	4	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN021

APIS320 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	SourceDB	Pfam	Phrog
IMGVR_UViG_3300006190_000247\|3300006190\|Ga0075446_1000239514	100.000	2.860E-106	333	1.000%	IMGVR	PF26880	phrog_2662 phrog_6090 phrog_67 phrog_4871 phrog_3956
IMGVR_UViG_3300027704_000270\|3300027704\|Ga0209816_100140114	99.200	2.086E-106	333	0.994%	IMGVR	PF26880	phrog_2662 phrog_6090 phrog_67 phrog_4871 phrog_3956
IMGVR_UViG_3300030110_004543\|3300030110\|Ga0183707_10004279	82.800	5.045E-85	272	0.994%	IMGVR	PF26880	phrog_2662 phrog_6090 phrog_67 phrog_4871 phrog_3956
IMGVR_UViG_3300027714_000553\|3300027714\|Ga0209815_100285713	97.400	4.463E-104	327	0.994%	IMGVR	PF26880	phrog_2662 phrog_6090 phrog_67 phrog_4871 phrog_3956