dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS305

Inhibited defense system

CLAN ID

CLAN032

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300037420_000483\|3300037420\|Ga0395906_0002375_7893_8459	gene_page:	188	20786.3	8.974	4.5

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF23791

Phrog

phrog_4197,phrog_2335,phrog_1506,phrog_4412,phrog_1056

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending Sir2-HerA,DUF4297-HerA because it belongs to the same clan as family APIS345 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS305	IMGVR_UViG_3300037420_000483\|3300037420\|Ga0395906_0002375_7893_8459	3	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN032

APIS305 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	SourceDB	Pfam	Phrog
IMGVR_UViG_3300037420_000483\|3300037420\|Ga0395906_0002375_7893_8459	100.000	7.026E-121	377	1.000%	IMGVR	PF23791	phrog_4197 phrog_2335 phrog_1506 phrog_4412 phrog_1056
IMGVR_UViG_3300037419_001114\|3300037419\|Ga0395903_0000192_7934_8500	93.800	3.097E-119	372	1.000%	IMGVR	PF23791	phrog_4197 phrog_2335 phrog_1506 phrog_4412 phrog_1056
IMGVR_UViG_3300037313_001071\|3300037313\|Ga0395908_0001117_23313_23879	94.400	3.402E-120	375	1.000%	IMGVR	PF23791	phrog_4197 phrog_2335 phrog_1506 phrog_4412 phrog_1056