dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS296

Inhibited defense system

CLAN ID

CLAN015

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300048930_000528\|3300048930\|Ga0498917_0001531_44018_44671	gene_page:	217	24483.4	5.2418	-4.5

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF25186

Phrog

phrog_2220,phrog_1200,phrog_325,phrog_5311,phrog_21

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending type I Thoeris because it belongs to the same clan as family APIS258 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS296	IMGVR_UViG_3300048930_000528\|3300048930\|Ga0498917_0001531_44018_44671	12	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN015

APIS296 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	SourceDB	Pfam	Phrog
IMGVR_UViG_3300048930_000528\|3300048930\|Ga0498917_0001531_44018_44671	100.000	2.612E-146	452	1.000%	IMGVR	PF25186	phrog_2220 phrog_1200 phrog_325 phrog_5311 phrog_21
IMGVR_UViG_3300036861_000616\|3300036861\|Ga0376049_0007641_5112_5708	73.600	1.247E-92	297	0.912%	IMGVR	PF25186	phrog_2220 phrog_1200 phrog_325 phrog_5311 phrog_21
IMGVR_UViG_3300020045_004561\|3300020045\|Ga0206662_10091661	60.800	4.390E-79	258	0.995%	IMGVR	PF25186	phrog_2220 phrog_1200 phrog_325 phrog_5311 phrog_21
IMGVR_UViG_3300031548_000001\|3300031548\|Ga0307408_10000010082	78.600	2.549E-106	336	0.959%	IMGVR	PF25186	phrog_2220 phrog_1200 phrog_325 phrog_5311 phrog_21
IMGVR_UViG_3300025009_000095\|3300025009\|Ga0209416_100019365	59.700	9.287E-77	251	0.991%	IMGVR	PF25186	phrog_2220 phrog_1200 phrog_325 phrog_5311 phrog_21
IMGVR_UViG_3300013232_000107\|3300013232\|Ga0170573_1061049126	74.300	4.923E-103	327	0.995%	IMGVR	PF25186	phrog_2220 phrog_1200 phrog_325 phrog_5311 phrog_21
IMGVR_UViG_3300009703_004110\|3300009703\|Ga0114933_10000002411	48.800	5.516E-56	191	0.968%	IMGVR	PF25186	phrog_2220 phrog_1200 phrog_325 phrog_5311 phrog_21
IMGVR_UViG_3300031715_000003\|3300031715\|Ga0307476_1000009659	51.200	2.353E-60	204	0.972%	IMGVR	PF25186	phrog_2220 phrog_1200 phrog_325 phrog_5311 phrog_21
IMGVR_UViG_3300047468_000157\|3300047468\|Ga0495560_0000141_9709_10368	66.300	3.291E-89	287	1.000%	IMGVR	PF25186	phrog_2220 phrog_1200 phrog_325 phrog_5311 phrog_21
IMGVR_UViG_3300009788_000093\|3300009788\|Ga0114923_100000484	42.900	2.865E-38	140	0.834%	IMGVR	PF25186	phrog_2220 phrog_1200 phrog_325 phrog_5311 phrog_21
IMGVR_UViG_3300024265_000037\|3300024265\|Ga0209976_10000045128	39.700	1.911E-40	146	0.972%	IMGVR	PF25186	phrog_2220 phrog_1200 phrog_325 phrog_5311 phrog_21
IMGVR_UViG_3300020171_000018\|3300020171\|Ga0180732_100010482	46.200	9.382E-52	179	0.972%	IMGVR	PF25186	phrog_2220 phrog_1200 phrog_325 phrog_5311 phrog_21