Seed protein information help

APIS family ID APIS293
Inhibited defense system Zorya type I
CLAN ID CLAN097
Seed protein property
Accession ID Gene name Protein length Molecular weight Isoelectric point Charge
QGJ86961.1 gene_page: ZadI-1 83 9701.15 9.4662 5
Phage property
Phage Assembly id
Pseudomonas phage vB_PaeM_SMS12 GCA_009685865.1
PMID/References PMID:40639337
PDB structures ;
Pfam domains
Phrog phrog_329,phrog_2373,phrog_3493,phrog_2158,phrog_4200
Host taxa d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas;s__Pseudomonas aeruginosa
Gene Location Start: 65118;  End: 65369;  Strand: -
Description ZadI-1 inhibits Zorya type I defense, as shown by efficiency of plating, culture collapse,and phage propagation assays

Seed genomic context      Download table help

Genome accession Start End Strand Protein ID Length Molecular weight Charge Isoelectric point Function Phrog PFAM

Seed genomic context- JBrowse     

Predicted 3D structure by alphafold2 with pTM = 0.57 Download help

pTM is for the estimate of the TM-score, which is obtained from a pairwise error prediction. The higher pTM score indicates better model quality.

pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see AlphaFold .

Residues were colored according to plddt ( blue-> high quality; red-> low quality ).

Full Sequence
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;      Download help

Structural homologs

No homologs found in AlphaFold database

No homologs found in esmfold database

Family information      Download help

Fam ID Seed protein Member count Model Alignment
APIS293 QGJ86961.1 51 HMM model Member alignment

Host Taxa distribution

Length distribution

Length Distribution Bar chart

Homology to other families       help

Clan ID: CLAN097

APIS293 has no similar APIS family.

Family members, sources, and their hosts        help

Results of representative protein blast against members.

Member pident evalue bitscore qcovs phage host SourceDB Pfam Phrog
MN871508_00049 85.100 1.589E-50 168 1.000% Pseudomonas phage pasz2 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
MT491206_00088 99.800 8.007E-54 177 1.000% Pseudomonas phage vB_PaeM_USP_3 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
MN131141_00014 97.600 2.599E-52 173 1.000% Pseudomonas phage PaP1_EPu-2019 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
LN610579_00014 99.200 2.068E-53 176 1.000% Pseudomonas phage vB_PaeM_PAO1_Ab27 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
PQ474312_00047 100.000 2.259E-54 179 1.000% Pseudomonas phage T35 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
FM201281_00085 97.400 3.566E-52 173 1.000% Pseudomonas phage LBL3 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
PQ474311_00047 100.000 3.100E-54 179 1.000% Pseudomonas phage T34 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
PP977456_00088 100.000 1.200E-54 180 1.000% Pseudomonas phage vB_PaeM_4002 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
KY000082_00034 99.400 1.507E-53 177 1.000% Pseudomonas phage PA5 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
PP977452_00073 98.600 5.343E-53 175 1.000% Pseudomonas phage vB_PaeM_1648 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
KR054030_00019 94.000 7.728E-50 166 1.000% Pseudomonas phage DL60 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
QGJ86961.1 100.000 8.746E-55 180 1.000% Pseudomonas phage vB_PaeM_SMS12 Pseudomonas aeruginosa NCBI phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
PQ521329_00087 100.000 1.646E-54 179 1.000% Pseudomonas phage vB_PaeM_1384 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
MF768470_00014 97.200 4.893E-52 172 1.000% Pseudomonas phage SL1 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
PV132263_00086 96.000 3.266E-51 170 1.000% Pseudomonas phage vB_PaeM_PAO1-BV1 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
PP716131_00047 99.200 2.068E-53 176 1.000% Pseudomonas phage vB_Pae_SG_Moreira_PyoP2 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
MN871461_00055 98.200 1.006E-52 174 1.000% Pseudomonas phage Pa-J Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
MN871454_00044 98.800 3.894E-53 175 1.000% Pseudomonas phage Pa-A Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
LC105990_00018 99.800 8.007E-54 177 1.000% Pseudomonas phage KPP22M3 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
OL362269_00087 99.200 2.068E-53 176 1.000% Pseudomonas phage 6959 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
OQ428192_00003 98.200 1.006E-52 174 1.000% Pseudomonas phage phiLCL12 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
MW595221_00088 100.000 1.200E-54 180 1.000% Pseudomonas phage vB_PaeM_V524 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
MGV-GENOME-0340294_45 98.600 5.343E-53 175 1.000% MGV phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
OQ828463_00086 99.400 1.507E-53 177 1.000% Pseudomonas phage PA_GL1 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
OQ594965_00025 99.400 1.507E-53 177 1.000% Pseudomonas phage SG1 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
OQ319932_00012 99.600 1.099E-53 177 1.000% Pseudomonas phage bmx-p2 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
OQ872152_00073 99.400 1.507E-53 177 1.000% Pseudomonas phage 4P Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
MT133562_00088 98.800 3.894E-53 175 1.000% Pseudomonas phage willy Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
KR869157_00091 100.000 4.253E-54 178 1.000% Pseudomonas phage vB_PaeM_CEB_DP1 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
OP310976_00045 99.800 8.007E-54 177 1.000% Pseudomonas phage Kara-mokiny kep-wari Wadjak 10 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
KM434184_00091 99.600 1.099E-53 177 1.000% Pseudomonas phage vB_Pae_PS44 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
OP310974_00083 99.800 8.007E-54 177 1.000% Pseudomonas phage Kara-mokiny kep-wari Wadjak 8 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
OP310970_00083 97.600 2.599E-52 173 1.000% Pseudomonas phage Kara-mokiny kep-wari Wadjak 4 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
PP781973_00040 95.800 4.481E-51 169 1.000% Pseudomonas phage vB_PaeM_RyC23_M4LORT Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
MT119366_00088 100.000 5.836E-54 178 1.000% Pseudomonas phage jett Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
MT118289_00040 96.000 3.266E-51 170 1.000% Pseudomonas phage Epa7 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
PQ149445_00044 92.300 9.715E-49 163 1.000% Pseudomonas phage BL7 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
AB560486_00088 96.600 1.264E-51 171 1.000% Pseudomonas phage KPP12 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
AP019535_00048 97.800 1.894E-52 173 1.000% Pseudomonas phage PA01 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
PQ567101_00087 98.400 7.332E-53 175 1.000% Pseudomonas phage HHBS42_2 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
PQ149444_00045 92.700 5.159E-49 164 1.000% Pseudomonas phage BL6 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
PP931176_00087 97.600 2.599E-52 173 1.000% Pseudomonas phage PADD Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
OR436899_00012 97.400 3.566E-52 173 1.000% Pseudomonas phage phiDCL-PA6 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
MW526258_00058 91.300 4.727E-48 161 1.000% Pseudomonas phage PhL_UNISO_PA-DSM_ph0031 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
PP596839_00081 98.200 1.006E-52 174 1.000% Pseudomonas phage WP1 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
ON857942_00082 100.000 5.836E-54 178 1.000% Pseudomonas phage vB_PaeM_FBPa21 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
LN610589_00014 100.000 5.836E-54 178 1.000% Pseudomonas phage vB_PaeM_C1-14_Ab28 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
OR611941_00092 92.500 7.080E-49 163 1.000% Pseudomonas phage PBJ Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
MW406974_00011 92.500 7.080E-49 163 1.000% Pseudomonas phage TH15 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
MZ089736_00051 91.900 1.829E-48 162 1.000% Pseudomonas phage PSA25 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200
LC472881_00053 95.000 1.589E-50 168 1.000% Pseudomonas phage R12 Pseudomonas INPHARED phrog_329 phrog_2373 phrog_3493 phrog_2158 phrog_4200