dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS273

Inhibited defense system

CLAN ID

CLAN013

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300050122_000155\|3300050122\|Ga0500011_001473_1938_2612	gene_page:	224	24257.5	4.2248	-9

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF10076

Phrog

phrog_469,phrog_3573,phrog_5298,phrog_21,phrog_325

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending AbiU because it belongs to the same clan as family APIS213 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS273	IMGVR_UViG_3300050122_000155\|3300050122\|Ga0500011_001473_1938_2612	56	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN013

APIS273 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	host	SourceDB	Pfam	Phrog
IMGVR_UViG_3300050122_000155\|3300050122\|Ga0500011_001473_1938_2612	100.000	1.000E-149	462	1.000%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_2824576265_000001\|2824576265\|2824577972	64.800	1.014E-77	254	0.879%	Paraburkholderia bannensis	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300047524_000030\|3300047524\|Ga0494052_00202_13198_13794	64.200	4.896E-77	252	0.884%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300048854_000277\|3300048854\|Ga0496063_0000399_65118_65792	83.700	2.167E-124	389	1.000%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300031084_000294\|3300031084\|Ga0308159_100032352	64.300	2.608E-77	253	0.884%	Klebsiella	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300046543_000441\|3300046543\|Ga0495645_0000141_17764_18438	69.200	1.076E-97	312	1.000%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_2773857668_000006\|2773857668\|2774109086	66.700	2.318E-79	259	0.866%	Burkholderia cenocepacia	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300006946_000062\|3300006946\|Ga0079104_10020597	64.200	3.573E-77	253	0.884%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_2597490103_000004\|2597490103\|2598309767	67.500	1.362E-80	263	0.866%	Burkholderia cenocepacia	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300019093_000145\|3300019093\|Ga0187843_100019346	65.200	8.168E-79	258	0.884%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_2902727578_000001\|2902727578\|2902732541	64.200	1.259E-76	251	0.879%	Trinickia dinghuensis	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_2711768653_000001\|2711768653\|2713635082	69.700	1.185E-98	315	1.000%	Caballeronia arationis	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300036792_000543\|3300036792\|Ga0376663_0000100_33443_34033	55.000	7.228E-62	209	0.879%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_2513237288_000002\|2513237288\|2514357886	54.200	4.806E-58	198	0.848%	Roseomonas sp000245075	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300048850_000084\|3300048850\|Ga0496059_000819_34563_35165	59.600	2.782E-65	218	0.835%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300048858_000060\|3300048858\|Ga0496068_003589_5231_5833	57.800	1.483E-65	219	0.857%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300049171_000178\|3300049171\|Ga0494678_000312_11956_12558	57.300	9.791E-65	217	0.857%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_2824147756_000002\|2824147756\|2824152369	56.100	1.212E-63	214	0.879%	Paraburkholderia tropica	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_2828244900_000006\|2828244900\|2828248847	56.600	2.515E-64	216	0.879%	Paraburkholderia tropica	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_2651870119_000002\|2651870119\|2653835998	58.100	8.741E-67	223	0.879%	Paraburkholderia caballeronis	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300006946_000002\|3300006946\|Ga0079104_100047756	45.700	1.227E-45	162	0.857%	Salmonella	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300035562_000054\|3300035562\|Ga0376655_0000073_40803_41399	45.300	5.880E-45	160	0.857%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300042922_000860\|3300042922\|Ga0456363_0032724_3065_3661	45.400	3.141E-45	160	0.857%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300042922_000476\|3300042922\|Ga0456363_0002086_3475_4071	45.700	1.227E-45	162	0.857%	Enterobacteriaceae	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300027111_000002\|3300027111\|Ga0209281_100056561	45.700	1.227E-45	162	0.857%	Enterobacteriaceae	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300050016_000038\|3300050016\|Ga0494708_0001289_19755_20300	57.400	1.514E-59	202	0.808%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300008886_000050\|3300008886\|Ga0115930_10051633	44.300	1.847E-43	155	0.862%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300042450_003451\|3300042450\|Ga0453063_0009140_2720_3439	44.300	1.847E-43	155	0.862%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300005673_000006\|3300005673\|Ga0074422_1000122	45.000	1.506E-44	158	0.862%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300029936_000107\|3300029936\|Ga0119925_10018613	45.000	1.506E-44	158	0.862%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300015262_000281\|3300015262\|Ga0182007_100030912	58.300	3.401E-67	224	0.879%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_2757320525_000005\|2757320525\|2758156157	60.100	4.591E-70	232	0.879%	Pseudomonas sp002000165	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300000063_000053\|3300000063\|PT4Draft_109268	56.000	2.274E-63	213	0.879%	Pseudomonas	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300034691_000075\|3300034691\|Ga0370488_000816_7751_8347	55.300	2.814E-62	210	0.879%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_2731639261_000002\|2731639261\|2731956473	57.000	5.219E-65	218	0.879%	Pseudomonas asplenii	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300046471_000252\|3300046471\|Ga0495650_0000596_7689_8285	59.600	3.033E-69	230	0.879%	Pseudomonadaceae	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300048929_000782\|3300048929\|Ga0496126_0000577_35109_35705	55.000	7.228E-62	209	0.879%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300021223_000004\|3300021223\|Ga0223640_10185313	57.200	2.031E-65	219	0.879%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300021246_000084\|3300021246\|Ga0223637_100201814	57.300	1.483E-65	219	0.879%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_2681813060_000002\|2681813060\|2682712933	60.700	5.072E-71	235	0.879%	Pseudomonas rhizoryzae	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300021090_000453\|3300021090\|Ga0210377_100276545	53.500	2.074E-59	201	0.879%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300046373_000022\|3300046373\|Ga0494103_003020_1700_2296	65.200	1.119E-78	257	0.884%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300046462_000488\|3300046462\|Ga0495651_0000392_25109_25705	64.600	2.608E-77	253	0.879%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300036780_000165\|3300036780\|Ga0376652_0051988_4105_4722	42.400	3.029E-39	143	0.839%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300031749_000042\|3300031749\|Ga0315298_100502422	54.900	1.356E-61	208	0.879%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_2895566225_000002\|2895566225\|2895567536	54.300	1.225E-60	205	0.879%	Komagataeibacter xylinus	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_2846433441_000009\|2846433441\|2846436861	54.600	3.482E-61	207	0.879%	Komagataeibacter oboediens	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_2731957626_000001\|2731957626\|2732474093	54.400	6.530E-61	206	0.879%	Komagataeibacter xylinus	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_2522572157_000005\|2522572157\|2523098339	51.400	5.356E-56	192	0.879%	Acetobacter nitrogenifigens	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_2547132370_000003\|2547132370\|2548482118	54.800	1.857E-61	207	0.879%	Komagataeibacter europaeus	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_2547132372_000004\|2547132372\|2548491619	54.500	4.768E-61	206	0.879%	Komagataeibacter europaeus	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_2547132373_000011\|2547132373\|2548493901	54.600	3.482E-61	207	0.879%	Komagataeibacter oboediens	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_2811995059_000001\|2811995059\|2812993183	55.600	8.000E-63	211	0.879%	Komagataeibacter rhaeticus	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_2841175817_000002\|2841175817\|2841176754	54.800	1.857E-61	207	0.879%	Komagataeibacter saccharivorans	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_2751185764_000005\|2751185764\|2753186603	55.300	2.814E-62	210	0.879%	Komagataeibacter nataicola	IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325
IMGVR_UViG_3300005529_000051\|3300005529\|Ga0070741_1000252125	49.800	1.225E-60	205	0.982%		IMGVR	PF10076	phrog_469 phrog_3573 phrog_5298 phrog_21 phrog_325