dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS267

Inhibited defense system

CLAN ID

CLAN002

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300028388_003891\|3300028388\|Ga0307031_1000188166	gene_page:	105	11957.1	4.7052	-5.5

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF26761

Phrog

phrog_6435,phrog_4201,phrog_2885,phrog_2998,phrog_4585

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending Type I CBASS because it belongs to the same clan as family APIS287,APIS361 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS267	IMGVR_UViG_3300028388_003891\|3300028388\|Ga0307031_1000188166	18	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN002

APIS267 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	host	SourceDB	Pfam	Phrog
IMGVR_UViG_3300028388_003891\|3300028388\|Ga0307031_1000188166	100.000	3.356E-71	229	1.000%		IMGVR	PF26761	phrog_6435 phrog_4201 phrog_2885 phrog_2998 phrog_4585
IMGVR_UViG_3300022821_000061\|3300022821\|Ga0222673_100018535	77.800	4.371E-35	125	0.733%		IMGVR	PF26761	phrog_6435 phrog_4201 phrog_2885 phrog_2998 phrog_4585
IMGVR_UViG_3300014962_000359\|3300014962\|Ga0134315_10016515	67.900	1.170E-38	135	0.933%		IMGVR	PF26761	phrog_6435 phrog_4201 phrog_2885 phrog_2998 phrog_4585
IMGVR_UViG_3300047160_007575\|3300047160\|Ga0500728_00667741_4096_4443	45.500	6.248E-21	84	0.943%		IMGVR	PF26761	phrog_6435 phrog_4201 phrog_2885 phrog_2998 phrog_4585
IMGVR_UViG_3300033148_001221\|3300033148\|Ga0366832_100831945	72.700	2.018E-37	132	0.838%		IMGVR	PF26761	phrog_6435 phrog_4201 phrog_2885 phrog_2998 phrog_4585
IMGVR_UViG_3300025655_000267\|3300025655\|Ga0208795_100029724	43.100	1.284E-21	86	0.962%		IMGVR	PF26761	phrog_6435 phrog_4201 phrog_2885 phrog_2998 phrog_4585
IMGVR_UViG_3300020048_000024\|3300020048\|Ga0207193_1000069141	66.500	8.229E-35	124	0.876%		IMGVR	PF26761	phrog_6435 phrog_4201 phrog_2885 phrog_2998 phrog_4585
IMGVR_UViG_3300031758_000072\|3300031758\|Ga0315907_100004174	71.200	2.203E-38	134	0.876%		IMGVR	PF26761	phrog_6435 phrog_4201 phrog_2885 phrog_2998 phrog_4585
IMGVR_UViG_3300036770_000716\|3300036770\|Ga0310126_0002985_25084_25368	67.600	1.129E-34	124	0.857%		IMGVR	PF26761	phrog_6435 phrog_4201 phrog_2885 phrog_2998 phrog_4585
IMGVR_UViG_3300028025_001283\|3300028025\|Ga0247723_10005263	67.400	1.549E-34	123	0.857%		IMGVR	PF26761	phrog_6435 phrog_4201 phrog_2885 phrog_2998 phrog_4585
IMGVR_UViG_3300035670_002451\|3300035670\|Ga0310129_0005116_7632_7913	67.000	2.917E-34	123	0.857%		IMGVR	PF26761	phrog_6435 phrog_4201 phrog_2885 phrog_2998 phrog_4585
IMGVR_UViG_3300014205_000237\|3300014205\|Ga0172380_1000067388	74.600	2.407E-39	137	0.848%		IMGVR	PF26761	phrog_6435 phrog_4201 phrog_2885 phrog_2998 phrog_4585
IMGVR_UViG_3300032271_000682\|3300032271\|Ga0335254_1271193119	67.600	1.233E-35	126	0.876%		IMGVR	PF26761	phrog_6435 phrog_4201 phrog_2885 phrog_2998 phrog_4585
IMGVR_UViG_3300046007_012555\|3300046007\|Ga0485182_000621_11207_11494	70.000	1.847E-36	129	0.857%		IMGVR	PF26761	phrog_6435 phrog_4201 phrog_2885 phrog_2998 phrog_4585
IMGVR_UViG_3300042519_000668\|3300042519\|Ga0453214_0000258_41582_41869	66.100	1.419E-33	121	0.857%	Actinobacteriota	IMGVR	PF26761	phrog_6435 phrog_4201 phrog_2885 phrog_2998 phrog_4585
IMGVR_UViG_3300043425_000476\|3300043425\|Ga0451744_0006314_7939_8232	68.500	2.535E-36	128	0.876%		IMGVR	PF26761	phrog_6435 phrog_4201 phrog_2885 phrog_2998 phrog_4585
IMGVR_UViG_3300024059_000004\|3300024059\|Ga0255040_1000000362	52.800	1.821E-25	97	0.895%		IMGVR	PF26761	phrog_6435 phrog_4201 phrog_2885 phrog_2998 phrog_4585
IMGVR_UViG_3300028598_000002\|3300028598\|Ga0265306_1000001683	58.700	3.741E-26	99	0.800%		IMGVR	PF26761	phrog_6435 phrog_4201 phrog_2885 phrog_2998 phrog_4585