dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS263

Inhibited defense system

CLAN ID

CLAN013

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_2831644885_000003\|2831644885\|2831646193	gene_page:	200	23552.8	5.1563	-4.5

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF10076

Phrog

phrog_1887,phrog_196,phrog_971,phrog_790,phrog_67

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending AbiU because it belongs to the same clan as family APIS213 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS263	IMGVR_UViG_2831644885_000003\|2831644885\|2831646193	4	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN013

APIS263 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	host	SourceDB	Pfam	Phrog
IMGVR_UViG_2831644885_000003\|2831644885\|2831646193	100.000	4.369E-140	433	1.000%	Ignatzschineria cameli	IMGVR	PF10076	phrog_1887 phrog_196 phrog_971 phrog_790 phrog_67
IMGVR_UViG_3300006879_001215\|3300006879\|Ga0079226_100016314	74.700	3.375E-94	301	0.985%		IMGVR	PF10076	phrog_1887 phrog_196 phrog_971 phrog_790 phrog_67
IMGVR_UViG_2831644885_000002\|2831644885\|2831645027	92.600	3.740E-125	390	1.000%	Ignatzschineria cameli	IMGVR	PF10076	phrog_1887 phrog_196 phrog_971 phrog_790 phrog_67
IMGVR_UViG_2831887192_000002\|2831887192\|2831888475	100.000	1.024E-138	429	0.990%	Ignatzschineria cameli	IMGVR	PF10076	phrog_1887 phrog_196 phrog_971 phrog_790 phrog_67