No AFmodels/IMGVR_UViG_3300037455_000234|3300037455|Ga0394157_0000359_47972_48463-plddt.txt found dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID APIS261
Inhibited defense system
CLAN ID CLAN052
Seed protein property
Accession ID Gene name Protein length Molecular weight Isoelectric point Charge
IMGVR_UViG_3300037455_000234|3300037455|Ga0394157_0000359_47972_48463
gene_page: 163 19371.9 4.4102 -10.5
Phage property
Phage Assembly id
PMID/References
PDB structures ;
Pfam domains PF25190
Phrog phrog_454,phrog_3883,phrog_511,phrog_2979,phrog_6651
Host taxa
Gene Location Start: ;  End: ;  Strand: 
Description
Note This family does not have seed protein, but we infer its function is defending type I Thoeris because it belongs to the same clan as family Tad5 which has seed protein.

Full Sequence
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;      Download help

Family information      Download help

Fam ID Seed protein Member count Model Alignment
APIS261 IMGVR_UViG_3300037455_000234|3300037455|Ga0394157_0000359_47972_48463 3 HMM model Member alignment

Host Taxa distribution

Length distribution

Length Distribution Bar chart

Homology to other families       help

Clan ID: CLAN052

APIS261 has no similar APIS family.

Family members, sources, and their hosts        help

Results of representative protein blast against members.

Member pident evalue bitscore qcovs phage host SourceDB Pfam Phrog
IMGVR_UViG_3300037455_000234|3300037455|Ga0394157_0000359_47972_48463 100.000 1.843E-106 334 1.000% IMGVR PF25190 phrog_454 phrog_3883 phrog_511 phrog_2979 phrog_6651
IMGVR_UViG_3300028833_000503|3300028833|Ga0247610_1000175630 57.300 1.365E-49 170 0.933% IMGVR PF25190 phrog_454 phrog_3883 phrog_511 phrog_2979 phrog_6651
IMGVR_UViG_3300028833_000434|3300028833|Ga0247610_1000142036 53.800 2.903E-47 163 0.969% IMGVR PF25190 phrog_454 phrog_3883 phrog_511 phrog_2979 phrog_6651