No AFmodels/IMGVR_UViG_3300027780_000012|3300027780|Ga0209502_1000022957-plddt.txt found dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID APIS250
Inhibited defense system
CLAN ID CLAN021
Seed protein property
Accession ID Gene name Protein length Molecular weight Isoelectric point Charge
IMGVR_UViG_3300027780_000012|3300027780|Ga0209502_1000022957
gene_page: 161 18428.2 9.7248 4.5
Phage property
Phage Assembly id
PMID/References
PDB structures ;
Pfam domains PF26880
Phrog phrog_2034,phrog_6005,phrog_116,phrog_291,phrog_4217
Host taxa
Gene Location Start: ;  End: ;  Strand: 
Description
Note This family does not have seed protein, but we infer its function is defending Kongming because it belongs to the same clan as family APIS279,APIS286 which has seed protein.

Full Sequence
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;      Download help

Family information      Download help

Fam ID Seed protein Member count Model Alignment
APIS250 IMGVR_UViG_3300027780_000012|3300027780|Ga0209502_1000022957 3 HMM model Member alignment

Host Taxa distribution

Length distribution

Length Distribution Bar chart

Homology to other families       help

Clan ID: CLAN021

APIS250 has no similar APIS family.

Family members, sources, and their hosts        help

Results of representative protein blast against members.

Member pident evalue bitscore qcovs phage host SourceDB Pfam Phrog
IMGVR_UViG_3300027780_000012|3300027780|Ga0209502_1000022957 100.000 1.014E-104 329 1.000% IMGVR PF26880 phrog_2034 phrog_6005 phrog_116 phrog_291 phrog_4217
IMGVR_UViG_3300000115_000358|3300000115|DelMOSum2011_100011607 77.900 2.534E-80 258 1.000% IMGVR PF26880 phrog_2034 phrog_6005 phrog_116 phrog_291 phrog_4217
IMGVR_UViG_3300027687_000068|3300027687|Ga0209710_10008552 95.300 2.380E-103 325 1.000% IMGVR PF26880 phrog_2034 phrog_6005 phrog_116 phrog_291 phrog_4217