dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS249

Inhibited defense system

CLAN ID

CLAN015

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300033148_003435\|3300033148\|Ga0366832_100118252	gene_page:	116	12946.5	4.5256	-6

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF25186

Phrog

phrog_4406,phrog_1794,phrog_2987,phrog_4352,phrog_724

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending type I Thoeris because it belongs to the same clan as family APIS258 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS249	IMGVR_UViG_3300033148_003435\|3300033148\|Ga0366832_100118252	8	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN015

APIS249 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	SourceDB	Pfam	Phrog
IMGVR_UViG_3300033148_003435\|3300033148\|Ga0366832_100118252	100.000	1.241E-75	242	1.000%	IMGVR	PF25186	phrog_4406 phrog_1794 phrog_2987 phrog_4352 phrog_724
IMGVR_UViG_3300033141_002284\|3300033141\|Ga0366833_10007786	64.500	1.182E-43	150	0.991%	IMGVR	PF25186	phrog_4406 phrog_1794 phrog_2987 phrog_4352 phrog_724
IMGVR_UViG_3300032893_000199\|3300032893\|Ga0335069_1000170616	69.500	1.415E-45	156	0.948%	IMGVR	PF25186	phrog_4406 phrog_1794 phrog_2987 phrog_4352 phrog_724
IMGVR_UViG_3300028666_000024\|3300028666\|Ga0265336_10000031255	63.100	2.790E-42	146	0.991%	IMGVR	PF25186	phrog_4406 phrog_1794 phrog_2987 phrog_4352 phrog_724
IMGVR_UViG_3300033153_002282\|3300033153\|Ga0366824_10048542	55.500	1.562E-32	118	0.940%	IMGVR	PF25186	phrog_4406 phrog_1794 phrog_2987 phrog_4352 phrog_724
IMGVR_UViG_3300027775_000001\|3300027775\|Ga0209177_1000000155	38.300	2.679E-17	74	0.931%	IMGVR	PF25186	phrog_4406 phrog_1794 phrog_2987 phrog_4352 phrog_724
IMGVR_UViG_3300006954_000001\|3300006954\|Ga0079219_1000000116	38.300	2.679E-17	74	0.931%	IMGVR	PF25186	phrog_4406 phrog_1794 phrog_2987 phrog_4352 phrog_724
IMGVR_UViG_3300036791_001655\|3300036791\|Ga0376662_0000174_32405_32752	62.100	1.700E-40	141	0.974%	IMGVR	PF25186	phrog_4406 phrog_1794 phrog_2987 phrog_4352 phrog_724