dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS233

Inhibited defense system

CLAN ID

CLAN013

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300023211_000115\|3300023211\|Ga0255842_124164215	gene_page:	229	25367.8	4.3867	-11

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF10076

Phrog

phrog_10,phrog_1101,phrog_684,phrog_3883,phrog_1068

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending AbiU because it belongs to the same clan as family APIS213 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS233	IMGVR_UViG_3300023211_000115\|3300023211\|Ga0255842_124164215	7	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN013

APIS233 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	host	SourceDB	Pfam	Phrog
IMGVR_UViG_3300023211_000115\|3300023211\|Ga0255842_124164215	100.000	9.293E-160	491	1.000%		IMGVR	PF10076	phrog_10 phrog_1101 phrog_684 phrog_3883 phrog_1068
IMGVR_UViG_3300010935_000203\|3300010935\|Ga0127392_10042726	43.600	2.177E-40	147	0.812%		IMGVR	PF10076	phrog_10 phrog_1101 phrog_684 phrog_3883 phrog_1068
IMGVR_UViG_3300040971_000342\|3300040971\|Ga0242423_000102_55532_56119	45.400	6.366E-44	157	0.812%	Rhodocyclaceae	IMGVR	PF10076	phrog_10 phrog_1101 phrog_684 phrog_3883 phrog_1068
IMGVR_UViG_3300040971_000151\|3300040971\|Ga0242423_002358_15341_15931	46.500	1.085E-45	162	0.812%		IMGVR	PF10076	phrog_10 phrog_1101 phrog_684 phrog_3883 phrog_1068
IMGVR_UViG_3300010373_000090\|3300010373\|Ga0134128_1000102934	41.200	6.046E-38	139	0.817%		IMGVR	PF10076	phrog_10 phrog_1101 phrog_684 phrog_3883 phrog_1068
IMGVR_UViG_3300015214_000388\|3300015214\|Ga0172382_100102455	44.500	2.726E-42	152	0.821%		IMGVR	PF10076	phrog_10 phrog_1101 phrog_684 phrog_3883 phrog_1068
IMGVR_UViG_3300037156_000435\|3300037156\|Ga0395916_000300_19580_20158	45.400	7.793E-43	154	0.808%		IMGVR	PF10076	phrog_10 phrog_1101 phrog_684 phrog_3883 phrog_1068