Seed protein information help

APIS family ID APIS224
Inhibited defense system cyclic oligonucleotide-based antiphage signalling system (CBASS)
CLAN ID CLAN093
Seed protein property
Accession ID Gene name Protein length Molecular weight Isoelectric point Charge
YP_002300322.1 gene_page: acb4 96 10871.3 4.6794 -3.5
Phage property
Phage Assembly id
Bacillus phage SPO1 GCF_000881675.1
PMID/References PMID:40845805
PDB structures 9E4W;
Pfam domains PF13876, PF13876
Phrog phrog_4492,phrog_687,phrog_4211,phrog_1041,phrog_1218
Host taxa d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae;g__Bacillus;
Gene Location Start: 19399;  End: 19689;  Strand: +
Description Acb4 proteins bind nucleotide signals and inhibit a broad range of CBASS operons.

Seed genomic context      Download table help

Genome accession Start End Strand Protein ID Length Molecular weight Charge Isoelectric point Function Phrog PFAM

Seed genomic context- JBrowse     

PDB structure: 9E4W ; Download help

Full Sequence      Download help

Structural homologs

No homologs found in AlphaFold database

No homologs found in esmfold database

Family information      Download help

Fam ID Seed protein Member count Model Alignment
APIS224 YP_002300322.1 6 HMM model Member alignment

Host Taxa distribution

Length distribution

Length Distribution Bar chart

Homology to other families       help

Clan ID: CLAN093

APIS224 has no similar APIS family.

Family members, sources, and their hosts        help

Results of representative protein blast against members.

Member pident evalue bitscore qcovs phage host SourceDB Pfam Phrog
IMGVR_UViG_2595698875_000001|2595698875|2596520350 93.500 4.469E-58 190 1.000% IMGVR PF13876 phrog_4492 phrog_687 phrog_4211 phrog_1041 phrog_1218
YP_002300322.1 100.000 4.469E-58 190 1.000% Bacillus phage SPO1 Bacillus NCBI PF13876 phrog_4492 phrog_687 phrog_4211 phrog_1041 phrog_1218
OM728299_00042 91.700 1.056E-56 186 1.000% Bacillus phage vB_BsuM-Goe19 Bacillus INPHARED PF13876 phrog_4492 phrog_687 phrog_4211 phrog_1041 phrog_1218
OM728298_00051 75.700 4.584E-44 150 1.000% Bacillus phage vB_BsuM-Goe16 Bacillus INPHARED PF13876 phrog_4492 phrog_687 phrog_4211 phrog_1041 phrog_1218
PP819608_00040 79.700 3.170E-47 159 1.000% Bacillus phage Adastra Bacillus INPHARED PF13876 phrog_4492 phrog_687 phrog_4211 phrog_1041 phrog_1218
OQ921337_00177 82.300 2.757E-49 165 1.000% Bacillus phage SPO1L2 Bacillus INPHARED PF13876 phrog_4492 phrog_687 phrog_4211 phrog_1041 phrog_1218