dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS222

Inhibited defense system

CLAN ID

CLAN012

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
MT028491_00053	gene_page:	118	13125.2	8.8581	5.5

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF10686

Phrog

phrog_6079,phrog_1012,phrog_2402,phrog_1075,phrog_770

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending AVAST type III because it belongs to the same clan as family APIS354 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS222	MT028491_00053	34	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN012

APIS222 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	phage	host	SourceDB	Pfam	Phrog
IMGVR_UViG_3300028800_001035\|3300028800\|Ga0265338_10000461105	37.000	1.785E-22	89	0.915%			IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300031456_000003\|3300031456\|Ga0307513_1000064839				%			IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300014593_000004\|3300014593\|Ga0121337_1000011577	52.400	2.453E-29	109	0.915%			IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300037423_001546\|3300037423\|Ga0395907_0000264_61214_61609	42.900	1.785E-22	89	0.822%			IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_2773857666_000003\|2773857666\|2774097579	37.700	1.356E-19	81	0.907%		Sphingobium barthaii	IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300037419_001398\|3300037419\|Ga0395903_0000194_5015_5407	39.700	2.549E-19	80	0.822%			IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300037418_002260\|3300037418\|Ga0395900_0000347_55021_55413	41.200	1.084E-20	84	0.822%			IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
OP484857_00079	40.300	1.236E-18	78	0.915%	Sinorhizobium phage AP-16-3	Sinorhizobium	INPHARED	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_2915986958_000002\|2915986958\|2915987306	40.600	6.574E-19	79	0.915%		Sinorhizobium meliloti	IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
OP484858_00032	38.900	2.117E-17	75	0.915%	Sinorhizobium phage NV1.1.1	Sinorhizobium	INPHARED	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300006169_000166\|3300006169\|Ga0082029_100778941	40.300	1.785E-22	89	0.915%			IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_2740892126_000002\|2740892126\|2742117677	40.900	7.579E-24	93	0.924%		Pseudomonas sp003205815	IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300011889_000037\|3300011889\|Ga0121545_10003171	42.000	9.086E-26	99	0.958%		Pseudomonas	IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300030390_002582\|3300030390\|Ga0183691_100002506	48.200	3.854E-27	103	0.958%		Pseudomonas	IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300011900_000019\|3300011900\|Ga0120971_10001557	46.200	2.142E-24	95	0.924%		Pseudomonas	IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_2519899602_000003\|2519899602\|2520298119	47.600	1.364E-26	101	0.958%		Pseudomonas stutzeri	IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300031839_002055\|3300031839\|Ga0326488_100002370	48.600	1.493E-27	104	0.958%		Pseudomonas	IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300014702_000003\|3300014702\|Ga0121493_10009315	51.000	7.937E-28	105	0.907%		Pseudomonas	IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300036444_000041\|3300036444\|Ga0401347_0102_36026_36418	44.600	4.029E-24	94	0.958%			IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300020045_016444\|3300020045\|Ga0206662_100540216	48.200	2.345E-25	98	0.907%			IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300044824_000108\|3300044824\|Ga0480580_003262_7063_7413	48.700	5.287E-27	102	0.915%			IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300015050_000784\|3300015050\|Ga0181338_10000422	44.300	1.364E-26	101	0.898%			IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300015050_000901\|3300015050\|Ga0181338_10002282	44.100	2.567E-26	100	0.898%			IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300017700_000708\|3300017700\|Ga0181339_100012616	41.400	1.426E-23	93	0.898%			IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300044613_002855\|3300044613\|Ga0453751_0001958_5721_6125	41.900	4.029E-24	94	0.898%			IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300036987_000397\|3300036987\|Ga0377238_010919_1079_1471	39.300	2.448E-22	89	0.941%			IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
MT028491_00053	100.000	4.450E-81	258	1.000%	Ochrobactrum phage vB_OspM_OC	Ochrobactrum	INPHARED	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300037418_002950\|3300037418\|Ga0395900_0000472_53065_53463	38.900	3.064E-21	86	0.907%			IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300042242_000032\|3300042242\|Ga0451631_000536_34136_34564	41.400	2.448E-22	89	0.864%			IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300004093_000014\|3300004093\|Ga0065178_10020220	30.600	6.808E-16	70	0.898%		Beijerinckiaceae	IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300026825_000018\|3300026825\|Ga0209909_100102105	30.600	6.808E-16	70	0.898%			IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_2928125067_000001\|2928125067\|2928126074	30.500	9.332E-16	70	0.898%		Methylobacterium fujisawaense	IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300024993_000014\|3300024993\|Ga0210008_100003347	32.600	4.966E-16	71	0.907%		Methylobacterium	IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770
IMGVR_UViG_3300005235_000270\|3300005235\|Ga0066637_10000031114	32.600	4.966E-16	71	0.907%		Methylobacterium	IMGVR	PF10686	phrog_6079 phrog_1012 phrog_2402 phrog_1075 phrog_770