dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID

APIS218

Inhibited defense system

CLAN ID

CLAN002

Seed protein property

Accession ID	Gene name	Protein length	Molecular weight	Isoelectric point	Charge
IMGVR_UViG_3300008255_002756\|3300008255\|Ga0100403_1000020114	gene_page:	94	10511.8	4.8838	-3.5

Phage property

Phage	Assembly id

PMID/References

PDB structures

;

Pfam domains

PF26761

Phrog

phrog_864,phrog_6435,phrog_3918,phrog_6102,phrog_1211

Host taxa

Gene Location

Start: ; End: ; Strand:

Description

Note

This family does not have seed protein, but we infer its function is defending Type I CBASS because it belongs to the same clan as family APIS287,APIS361 which has seed protein.

Full Sequence

90 < plddt <=100 ;

70 < plddt <= 90 ;

50 < plddt <= 70 ;

0 <= plddt <= 50 ; Download help

Family information Download help

Fam ID	Seed protein	Member count	Model	Alignment
APIS218	IMGVR_UViG_3300008255_002756\|3300008255\|Ga0100403_1000020114	10	HMM model	Member alignment

Host Taxa distribution

Length distribution

Homology to other families help

Clan ID: CLAN002

APIS218 has no similar APIS family.

Family members, sources, and their hosts help

Results of representative protein blast against members.

Member	pident	evalue	bitscore	qcovs	SourceDB	Pfam	Phrog
IMGVR_UViG_3300008255_002756\|3300008255\|Ga0100403_1000020114	100.000	4.651E-59	193	1.000%	IMGVR	PF26761	phrog_864 phrog_6435 phrog_3918 phrog_6102 phrog_1211
IMGVR_UViG_3300045741_000480\|3300045741\|Ga0484981_0000336_19516_19776	66.000	1.187E-29	109	0.853%	IMGVR	PF26761	phrog_864 phrog_6435 phrog_3918 phrog_6102 phrog_1211
IMGVR_UViG_3300010403_000705\|3300010403\|Ga0134123_1000000175	77.800	5.451E-32	115	0.747%	IMGVR	PF26761	phrog_864 phrog_6435 phrog_3918 phrog_6102 phrog_1211
IMGVR_UViG_3300015360_001243\|3300015360\|Ga0163144_10000165157	65.500	4.872E-27	101	0.800%	IMGVR	PF26761	phrog_864 phrog_6435 phrog_3918 phrog_6102 phrog_1211
IMGVR_UViG_3300035661_003753\|3300035661\|Ga0373633_0017517_4235_4471	74.700	6.140E-26	98	0.663%	IMGVR	PF26761	phrog_864 phrog_6435 phrog_3918 phrog_6102 phrog_1211
IMGVR_UViG_3300025018_000091\|3300025018\|Ga0210043_100000379	97.700	1.449E-53	177	0.895%	IMGVR	PF26761	phrog_864 phrog_6435 phrog_3918 phrog_6102 phrog_1211
IMGVR_UViG_3300035180_003625\|3300035180\|Ga0373631_0004413_13056_13295	74.700	6.140E-26	98	0.663%	IMGVR	PF26761	phrog_864 phrog_6435 phrog_3918 phrog_6102 phrog_1211
IMGVR_UViG_3300009177_000720\|3300009177\|Ga0105248_10000046129	66.400	3.549E-27	102	0.768%	IMGVR	PF26761	phrog_864 phrog_6435 phrog_3918 phrog_6102 phrog_1211
IMGVR_UViG_3300037475_000240\|3300037475\|Ga0400313_0000002_125923_126156	74.900	1.089E-28	106	0.716%	IMGVR	PF26761	phrog_864 phrog_6435 phrog_3918 phrog_6102 phrog_1211
IMGVR_UViG_3300047462_000385\|3300047462\|Ga0495311_0001386_107919_108173	77.600	2.655E-31	113	0.737%	IMGVR	PF26761	phrog_864 phrog_6435 phrog_3918 phrog_6102 phrog_1211