No AFmodels/IMGVR_UViG_3300001748_001095|3300001748|JGI11772J19994_10021762-plddt.txt found dbAPIS: a database of anti-prokaryotic immune systems

Seed protein information help

APIS family ID APIS212
Inhibited defense system
CLAN ID CLAN021
Seed protein property
Accession ID Gene name Protein length Molecular weight Isoelectric point Charge
IMGVR_UViG_3300001748_001095|3300001748|JGI11772J19994_10021762
gene_page: 155 18031.7 10.2088 7.5
Phage property
Phage Assembly id
PMID/References
PDB structures ;
Pfam domains PF26880,PF25109
Phrog phrog_4747,phrog_687,phrog_3004,phrog_5667,phrog_1698
Host taxa
Gene Location Start: ;  End: ;  Strand: 
Description
Note This family does not have seed protein, but we infer its function is defending Kongming because it belongs to the same clan as family APIS279,APIS286 which has seed protein.

Full Sequence
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;      Download help

Family information      Download help

Fam ID Seed protein Member count Model Alignment
APIS212 IMGVR_UViG_3300001748_001095|3300001748|JGI11772J19994_10021762 3 HMM model Member alignment

Host Taxa distribution

Length distribution

Length Distribution Bar chart

Homology to other families       help

Clan ID: CLAN021

APIS212 has no similar APIS family.

Family members, sources, and their hosts        help

Results of representative protein blast against members.

Member pident evalue bitscore qcovs phage host SourceDB Pfam Phrog
IMGVR_UViG_3300001748_001095|3300001748|JGI11772J19994_10021762 100.000 2.426E-99 313 1.000% IMGVR PF26880 phrog_4747 phrog_687 phrog_3004 phrog_5667 phrog_1698
IMGVR_UViG_3300021375_000761|3300021375|Ga0213869_100078279 69.000 9.307E-66 216 0.994% IMGVR PF26880 phrog_4747 phrog_687 phrog_3004 phrog_5667 phrog_1698
IMGVR_UViG_3300000116_007134|3300000116|DelMOSpr2010_100011685 69.000 9.307E-66 216 0.994% IMGVR PF26880 phrog_4747 phrog_687 phrog_3004 phrog_5667 phrog_1698